DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and slc9a3r1a

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_997872.2 Gene:slc9a3r1a / 327272 ZFINID:ZDB-GENE-031006-7 Length:384 Species:Danio rerio


Alignment Length:226 Identity:51/226 - (22%)
Similarity:88/226 - (38%) Gaps:51/226 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   867 GIAHKNGQI--HV-------------GDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRS- 915
            |..:|.||.  ||             ||:|..::..:|:........|.:::....::|.:|.: 
Zfish    25 GEKNKPGQFIRHVEPDSPAAAAGLLAGDKLALVNGENVEDEKHQQVVSRIRDTVGKLELVVLNAE 89

  Fly   916 -------HDL-------ANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGS-GNANGGGAVNGN 965
                   |:|       .:|..:|        ....|.....|..:|:||.. ...||...::..
Zfish    90 TAELLLKHNLKCQKEYVTDGIPIP--------AGSEPEDEVKNGTSSRESTPVPETNGDMRIDRL 146

  Fly   966 SGSGK-------PRVFHVTLYKDKVYDDYGFSVSDGLYERGVFINRIRSGGPADMCGLLKPFDRI 1023
            |.|.|       ||:.|:    .|....|||::.....:.|.:|..:....||:..| |:|.|:|
Zfish   147 SVSSKDSKNELRPRLCHI----KKGATGYGFNLHTEKTKPGQYIRAVDEDSPAEKSG-LRPQDKI 206

  Fly  1024 MQVNEMKTQDFDCCLTVPLIAAAGDKIEMIM 1054
            :|||.:..........|..|.|.||:.::::
Zfish   207 VQVNGISVHTMQHSEVVAAIKAGGDETKLLV 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492 12/60 (20%)
PDZ_signaling 973..1055 CDD:238492 22/82 (27%)
slc9a3r1aNP_997872.2 PDZ_signaling 7..86 CDD:238492 12/60 (20%)
PDZ_signaling 159..238 CDD:238492 24/84 (29%)
EBP50_C 242..384 CDD:312529
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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