DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and CG5921

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster


Alignment Length:902 Identity:180/902 - (19%)
Similarity:278/902 - (30%) Gaps:365/902 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 STIGLSNQKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSLCVTSKLAQITVER---------- 188
            ||...::..||.:.....|..|        ::|          .:|:|..:.:.|          
  Fly    32 STTSSASSDVMTLTTTAASSWC--------AIP----------ASSRLRVLRLVRPHQRRLLVGG 78

  Fly   189 -ESG-CLGLTLRGGADY--PLIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIK 249
             |.| ..|.|:|||.::  ...|:||...|..:..| ::.||::||::...|......|..|:  
  Fly    79 PERGSTYGFTVRGGREHGTGFFVSHVEHGGEAHLKG-LRIGDQILRINGFRLDDAVHKEFIQL-- 140

  Fly   250 CGGHVSGYTNLTIEY---------DV-------SVVQSVEFSMGP---------------LLIEI 283
                |:|...:|::.         |:       |||:....|..|               :.:.:
  Fly   141 ----VAGQDRVTLKVRGVGMLPVRDLPEERLSWSVVKLPSVSGTPSESSFKGERRGASRDISVVL 201

  Fly   284 ERPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIADRCGALSVGDQVL 348
            ......||||.:|                   :..|...|:|:......|:|...| |..|||:|
  Fly   202 HVAPRTKLGLGIC-------------------KGPEWKPGIFVQFTKDRSVAREAG-LRPGDQIL 246

  Fly   349 SIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSST 413
            |::........||  |.:.::.:|                               |.|:....:.
  Fly   247 SVNSIDFSDVLFS--EAVAVMKSS-------------------------------SKLDMVVRTA 278

  Fly   414 AGRQRQRFARKSSLPLENPACGT-PG-STGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHG 476
            ||                  |.. || |:|.:.....:.|..|             |...|....
  Fly   279 AG------------------CDLFPGESSGYNSSASSVTGDQS-------------PCWADAKSK 312

  Fly   477 AGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAMRQLLEGGSSR 541
            ....:.|. ||:||.|.                                           |.||.
  Fly   313 RLTAVREE-SGAGGGGC-------------------------------------------GLSSA 333

  Fly   542 NGASNGTPANWLE-LEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGS 605
            .||  |:| ||.: :|:...|...::.                  |:.:|:|.....|:... ||
  Fly   334 PGA--GSP-NWSQGVEVHKQMNKTIIK------------------LTENGTSINNTYIASTG-GS 376

  Fly   606 PAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEEGRSQ----NPSHSSSDFTTLTIKRIVLPDFL 666
            ....|||..||                     ..||||    |||:.|.:.||:  ||..|    
  Fly   377 SVSGSGSTGSG---------------------TSGRSQQSQSNPSNPSRNSTTM--KRSHL---- 414

  Fly   667 PMSSPIYSNCPASGINLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDD 731
               .|:  |...|||.|..|...|..           :||.                        
  Fly   415 ---RPV--NSAGSGIGLSSGSAGSAG-----------SAGS------------------------ 439

  Fly   732 ASLQSVQLRSGSGSNGGNQAA-------NSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYP 789
                     |||||..|...|       .:.:.|.|:...|....:.::|.||.:.:::|:|...
  Fly   440 ---------SGSGSRSGGVIAPAPAPPPPAMNEGANASGSVGSSLSSAITEELKKRKEKQQQQQH 495

  Fly   790 GYELNRYASVDCTALPPPMENKVYGSAASSSSKSS-GSSLHQIIFTVRLEPKGGLLGI--TLAGS 851
            ....||....|...   .::.::.|...:...:|| |...|:        .:..:.|:  ||.||
  Fly   496 QQRHNRDRDRDGNG---NVDRQLTGHNGNGGHRSSVGQVSHR--------QRANVAGVAATLQGS 549

  Fly   852 EDITKSITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSH 916
            |.|: ::| .|...||....||....|.     |:|:.                 |:| :..|:|
  Fly   550 ERIS-NLT-GGGGAGGAGGSNGAAGAGG-----DQHTA-----------------LMD-EFKRAH 589

  Fly   917 D--LANGSHLPQTQAIYAKVQRRPRSPSAN-----TEAS----KESGSGNANGGGAV 962
            .  ..||.|..:     .|:....:|..|:     .|.|    |..|||...|.|.:
  Fly   590 QRMFRNGFHESE-----HKLSSLGKSSLADRSLYGREMSLLRVKNGGSGGGEGSGVM 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 4/12 (33%)
PDZ_signaling 183..254 CDD:238492 20/84 (24%)
PDZ_signaling 278..375 CDD:238492 22/111 (20%)
PDZ 496..>521 CDD:294084 0/24 (0%)
PDZ_signaling 571..658 CDD:238492 21/90 (23%)
PDZ_signaling 832..913 CDD:238492 18/82 (22%)
PDZ_signaling 973..1055 CDD:238492
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 21/76 (28%)
PDZ_signaling 197..276 CDD:238492 23/131 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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