Sequence 1: | NP_572285.2 | Gene: | Grip / 50391 | FlyBaseID: | FBgn0029830 | Length: | 1058 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229284.1 | Gene: | Ush1c / 308596 | RGDID: | 1303329 | Length: | 910 | Species: | Rattus norvegicus |
Alignment Length: | 948 | Identity: | 175/948 - (18%) |
---|---|---|---|
Similarity: | 313/948 - (33%) | Gaps: | 272/948 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 116 HAADFLAPGD-----------RLHQIDGISTIGLSNQKVMN-----MLCAGGSDACPAIVEIEYS 164
Fly 165 LPECTVSQNSLCVTSKLAQITVER--ESGCLGLTLRGGADY--PLIVTHVRPHGPVYKTGRIKPG 225
Fly 226 DRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERPMN-- 288
Fly 289 --DKLGLVLCNYTAAVPASG---SGSSTPSSGEKIE----------------------ESAGVFI 326
Fly 327 ASILPASIADRCGALSVGDQVL---SIDDTMIEHTAFSPDEVMTILDTS--------TGRG---- 376
Fly 377 --------------YTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSL 427
Fly 428 PLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGA--GIILSETVSGSGG 490
Fly 491 SGAVAIAQIVPDSVADRSGCIQAGDRIVAINK------MYSLDA---AAMRQLLEGGSSRNGASN 546
Fly 547 GTPANWLELEIE---FDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAH 608
Fly 609 RSGSLRSGDILLAVDQ-------HPVQHFNVDALLKEEGRSQNPSH-SSSDFTTLTIKRIVLPDF 665
Fly 666 LPMSSPIYSNCPASGINLGM-GMGVSTSTDH-DLYSSAYVTAGKYADCVSLKSRTPQPDYF---- 724
Fly 725 RVPSMD-------DASLQSV----QLRSGSGSNGGNQAANSWSTGVNS----------RSYVAPP 768
Fly 769 NTQSLTTELPEEE-----DEQEQMYPGYELNRYASVDCTALPPPMENK--VYGSAASSSSKS--- 823
Fly 824 -----SGSSLHQI----IFTVRLEPKGGLLGITLAGSEDI-TKSITISGLVEGGIAHKNGQIHVG 878
Fly 879 DQLLAIDEHSVQGMPLSHATSLLQNL----GDLVDLKI 912 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grip | NP_572285.2 | PDZ | 82..147 | CDD:294084 | 9/46 (20%) |
PDZ_signaling | 183..254 | CDD:238492 | 19/74 (26%) | ||
PDZ_signaling | 278..375 | CDD:238492 | 27/136 (20%) | ||
PDZ | 496..>521 | CDD:294084 | 3/24 (13%) | ||
PDZ_signaling | 571..658 | CDD:238492 | 18/94 (19%) | ||
PDZ_signaling | 832..913 | CDD:238492 | 26/86 (30%) | ||
PDZ_signaling | 973..1055 | CDD:238492 | |||
Ush1c | XP_006229284.1 | harmonin_N | 2..80 | CDD:259819 | 14/70 (20%) |
PDZ_signaling | 85..165 | CDD:238492 | 22/89 (25%) | ||
PDZ_signaling | 209..289 | CDD:238492 | 17/85 (20%) | ||
Cgr1 | <316..>358 | CDD:281823 | 5/41 (12%) | ||
PDZ_signaling | 751..838 | CDD:238492 | 26/88 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |