DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and Mpdz

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_006238402.1 Gene:Mpdz / 29365 RGDID:3105 Length:2068 Species:Rattus norvegicus


Alignment Length:1174 Identity:262/1174 - (22%)
Similarity:430/1174 - (36%) Gaps:348/1174 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PMLSVDRAMSPAQSEDSGLAPE----RGTTYATITLPRNALHLAITFAERNDL--SYPPVVG--- 109
            |:||.:...:....:::.|..:    .|..|..:     ..|:: .|:|.:.|  |....||   
  Rat   511 PLLSTELEETEDVQQEAALLTKWQRIMGINYEIV-----VAHVS-KFSENSGLGISLEATVGHHF 569

  Fly   110 -----SLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMN----------MLCAGGSDACPAIV 159
                 ...||||:.. |..||.|.:::||:.:|.::|.|:|          |:|...:....|:.
  Rat   570 IRSVLPEGPVGHSGK-LFSGDELLEVNGINLLGENHQDVVNILKELPIDVTMVCCRRTVPPTALS 633

  Fly   160 EIEY----------------------------SLPECTVSQNSLCVTSKLAQ-------ITVERE 189
            |::.                            .|....|.||:..:.:.||.       |.:|:.
  Rat   634 EVDSLDIHDLELTEKPHIDLGEFIGSSETEDPMLAMSDVDQNAEEIQTPLAMWEAGIQAIELEKG 698

  Fly   190 SGCLGLTLRGGADYP---------LIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQ 245
            |..||.::   .||.         :::..:.|.|...|.||:.|||||:.|::::|...||.||.
  Rat   699 SRGLGFSI---LDYQDPIDPANTVIVIRSLVPGGIAEKDGRLFPGDRLMFVNDINLENSTLEEAV 760

  Fly   246 QIIKCGGHVSGYTNLTI---------EYDVSVVQSVEFSMGPLLIEIERPMNDK------LGLVL 295
            :.:|  |..||...:.:         |..||..:.. |...|...: |..::||      |.|:.
  Rat   761 EALK--GAPSGMVRIGVAKPLPLSPEEGYVSAKEDT-FLCSPHTCK-EMGLSDKALFRADLALID 821

  Fly   296 CNYTAAV----------PASGSGSSTPSSGEKIEESA---GVFIASILPAS-------IADRCGA 340
            .....:|          |.:.|..||.:|...:.:.|   |:.....||:|       .:|....
  Rat   822 TPDAESVAESRFESQFSPDNDSVYSTQASVLSLHDGACSDGMNYGPSLPSSPPKDVTNSSDLVLG 886

  Fly   341 LSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARR---GHTTLGSPKYS 402
            |.:..:.|...:.:....|.||...|:...||   |:|.....||:|:.::   .:|...:|   
  Rat   887 LHLSLEELYTQNLLQRQHAGSPPTDMSPAATS---GFTVSDYTPANAVEQKYECANTVAWTP--- 945

  Fly   403 FSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGS---------TGGSMGTGGIH-------G 451
             |.|.|..|:|        ....:||...|...|..|         |..||......       |
  Rat   946 -SQLPSGLSTT--------ELAPALPAVAPKYLTEQSSLVSDAESVTLQSMSQEAFERTVTIAKG 1001

  Fly   452 SSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDR 516
            ||||||.:...:           .|.|:|:...:.|    ||::           |.|.|..||.
  Rat  1002 SSSLGMTVSANK-----------DGLGVIVRSIIHG----GAIS-----------RDGRIAVGDC 1040

  Fly   517 IVAINK-----MYSLDAAAM--RQLLEGGSSRNGASNG-----------TPANWL-ELEIEFDMP 562
            |::||:     :.:..|.||  |..|.|...:..|:..           .||..| |..:.|...
  Rat  1041 ILSINEESTISLTNAQARAMLRRHSLIGPDIKFSAAPADDRAPFYVITYVPAEHLEEFRVSFGQQ 1105

  Fly   563 DAVVPASGVFS------------------------------------VKLLRAGKCGLGLSVSGS 591
            ...:.|..:||                                    |:|.|.....||:|:.|.
  Rat  1106 AGGIMALDIFSSYTGRDIPELPEREEGEGEESELQNAAYSSWSQPRRVELWREPSKSLGISIVGG 1170

  Fly   592 -------SHG----GLVISDVKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEEGRSQNP 645
                   |:|    |:.|..|...|||.::|:|:.||.::.||...::..:.:..::...::.:|
  Rat  1171 RGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGSP 1235

  Fly   646 SHSSSDFTTLTIKRIVLPDFLPMSSPIYSNCPASGINLGMGMGVSTSTDHDLY-SSAYVTAGKYA 709
                   ....::.||   ..|..||:                  .|..|.|| ..::.:...:|
  Rat  1236 -------VVFMVQSIV---NRPRKSPL------------------PSLPHSLYPKCSFSSTNPFA 1272

  Fly   710 DCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWSTGVNSRSYVAPPNTQSLT 774
            :.:.|.|.       :.||..::..:...|.|...|          |..|.|.  ::....|...
  Rat  1273 ESLQLTSD-------KAPSQSESESEKATLCSVPSS----------SPSVFSE--MSSDYAQPSA 1318

  Fly   775 TELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSKSSGSSLHQIIFTVRLEP 839
            |.:.|:||::::.  ||.....             .:.||:..        ..||.|    .||.
  Rat  1319 TTVAEDEDKEDEF--GYSWKNI-------------QERYGTLT--------GQLHMI----ELEK 1356

  Fly   840 KGGLLGITLAGSEDITK-SITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQN 903
            ....||::|||::|.|: |:.|.|:...|.|.::|::.:.|:||.|:...:.|....:|:|:::.
  Rat  1357 GHSGLGLSLAGNKDRTRMSVFIVGIDPTGAAGRDGRLQIADELLEINGQILYGRSHQNASSIIKC 1421

  Fly   904 LGDLVDLKILRSHDLAN------GS---HLPQTQAIYAKVQRRPRSPSANTEASKESGSGNANGG 959
            ....|.:..:|:.|..|      ||   .||.|.   ...|.:...||..|.||....|...|  
  Rat  1422 APSKVKIIFIRNADAVNQMAVCPGSAADPLPSTS---ESPQNKEVEPSITTSASAVDLSSLTN-- 1481

  Fly   960 GAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDGLYERGVFINRIRSGGPADMCGLLKPFDRIM 1024
                         |:|:.|.||:  ...|.::.:.....||.|..:...|.|...|.|||.|||:
  Rat  1482 -------------VYHLELPKDQ--GGLGIAICEEDTLNGVTIKSLTERGGAAKDGRLKPGDRIL 1531

  Fly  1025 QVNE 1028
            .|::
  Rat  1532 AVDD 1535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 21/84 (25%)
PDZ_signaling 183..254 CDD:238492 25/86 (29%)
PDZ_signaling 278..375 CDD:238492 26/122 (21%)
PDZ 496..>521 CDD:294084 6/24 (25%)
PDZ_signaling 571..658 CDD:238492 24/133 (18%)
PDZ_signaling 832..913 CDD:238492 23/81 (28%)
PDZ_signaling 973..1055 CDD:238492 19/56 (34%)
MpdzXP_006238402.1 L27_2 6..63 CDD:117611
PDZ_signaling 140..222 CDD:238492
PDZ_signaling 256..335 CDD:238492
PDZ 374..463 CDD:214570
PDZ_signaling 552..621 CDD:238492 19/69 (28%)
PDZ_signaling 693..776 CDD:238492 27/87 (31%)
PDZ_signaling 993..1063 CDD:238492 24/95 (25%)
PDZ_signaling 1150..1241 CDD:238492 22/97 (23%)
PDZ 1348..1433 CDD:214570 26/88 (30%)
PDZ_signaling 1482..1561 CDD:238492 19/56 (34%)
MPDZ_u10 1563..1624 CDD:293272
PDZ 1625..1709 CDD:214570
PDZ_signaling 1721..1801 CDD:238492
PDZ_signaling 1858..1943 CDD:238492
PDZ_signaling 1984..2067 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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