DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and Dlg1

DIOPT Version :10

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_038943945.1 Gene:Dlg1 / 25252 RGDID:2505 Length:939 Species:Rattus norvegicus


Alignment Length:1099 Identity:189/1099 - (17%)
Similarity:342/1099 - (31%) Gaps:415/1099 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSFNGHHH----PPTDTA--LAPMLSVDRAMS-PAQSEDSGLAPERGTTYATITLPRNALHLAIT 95
            :.|..|.|    .||:..  .:|::.|..|:. ||:|              .:.||...      
  Rat   149 HGFVSHSHISPIKPTEAVPPSSPIVPVTPALPVPAES--------------PVVLPSTP------ 193

  Fly    96 FAERNDLSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACPAIVE 160
                 ..:.|||:                        ::|..|.....:|     |:||     :
  Rat   194 -----QANPPPVL------------------------VNTDSLETPTYVN-----GTDA-----D 219

  Fly   161 IEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP-------LIVTHVRPHGPVYK 218
            .||.                  :||:||.:..||.::.||.|.|       :.:|.:...|...:
  Rat   220 YEYE------------------EITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQ 266

  Fly   219 TGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEI 283
            .||::..|.:|||:...:...|.::|.:.:|..|              |:|:        |.::.
  Rat   267 DGRLRVNDCILRVNEADVRDVTHSKAVEALKEAG--------------SIVR--------LYVKR 309

  Fly   284 ERPMNDK------------LGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIAD 336
            .:|.::|            ||..:        |.|.|:      :.|.....:::..|:....|.
  Rat   310 RKPASEKIMEIKLIKGPKGLGFSI--------AGGVGN------QHIPGDNSIYVTKIIEGGAAH 360

  Fly   337 RCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKY 401
            :.|.|.:||::|:::...:|..  :.:|.:|.|..::...|.::                     
  Rat   361 KDGKLQIGDKLLAVNSVCLEEV--THEEAVTALKNTSDFVYLKV--------------------- 402

  Fly   402 SFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAES 466
                                |:.:|:.: |.....|..|..|..:...|.|.|..:|.       
  Rat   403 --------------------AKPTSMYI-NDGYAPPDITNSSSQSVDNHVSPSSYLGQ------- 439

  Fly   467 FPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAM 531
                                             .|.|.|          |...|:|....|....
  Rat   440 ---------------------------------TPASPA----------RYSPISKAVLGDDEIT 461

  Fly   532 RQLLEGGSSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHG-G 595
            |:                            |..||          |..|..|||.::.|...| |
  Rat   462 RE----------------------------PRKVV----------LHRGSTGLGFNIVGGEDGEG 488

  Fly   596 LVISDVKMGSPAHRSGSLRSGDILL---AVDQHPVQHFNVDALLKEEGRS--------------- 642
            :.||.:..|.||..||.||.||.::   :||.....|....|.||..|::               
  Rat   489 IFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRF 553

  Fly   643 -----------QNPSHSSSDFTTLTIKR--IVLPDFLPMSSPIYSNCPASGINLGMG--MGVSTS 692
                       .|.|.||...:..|.::  :.:...........|..|:.|:|...|  :.|..:
  Rat   554 EAKIHDLREQMMNSSVSSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINA 618

  Fly   693 TDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWST 757
            :|.:.:.:..||....:|.|.:     .|...||...:.|.|::|:..|.:..:.|....:....
  Rat   619 SDDEWWQARQVTPDGESDEVGV-----IPSKRRVEKKERARLKTVKFNSKTRGDKGQSFNDKRKK 678

  Fly   758 GVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSK 822
            .:.||.:....|         :::.|||..    :.:::.                     :|:.
  Rat   679 NLFSRKFPFYKN---------KDQSEQETS----DADQHV---------------------TSNA 709

  Fly   823 SSGSSLHQIIFTVRLE-PKGG----LLGITLAGSEDI--TKSITISGLVEGGIAHKNGQIHVGDQ 880
            |...|.:.|:.|.... .|||    :|.......:::  |:.:.|.|.::.         .|.|.
  Rat   710 SDSESSYLILITDEYGCSKGGQEEYVLSYEPVNQQEVNYTRPVIILGPMKD---------RVNDD 765

  Fly   881 LLA----------------IDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQA 929
            |::                ..::.|.|......||..|...|:.:.|.:.:....|..:....|:
  Rat   766 LISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLYGTSVQS 830

  Fly   930 IYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDG 994
            :.|..::                     |...:...||:...|:....||...::      :...
  Rat   831 VRAVAEK---------------------GKHCILDVSGNAIKRLQIAQLYPISIF------IKPK 868

  Fly   995 LYERGVFINRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMI 1053
            ..|..:.:|:..:...|     .|.|:|.:::.:..|:.|...:       .||.:|.|
  Rat   869 SMENIMEMNKRLTDEQA-----RKTFERAVRLEQEFTEHFTAIV-------QGDTLEDI 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ_canonical <96..163 CDD:483948 9/66 (14%)
PDZ2_GRIP1-2-like 180..265 CDD:467169 22/91 (24%)
PDZ3_GRIP1-2-like 277..384 CDD:467172 21/118 (18%)
degP_htrA_DO <491..659 CDD:273938 42/197 (21%)
PDZ_canonical 572..>623 CDD:483948 19/54 (35%)
PDZ6_GRIP1-2-like 830..914 CDD:467171 19/106 (18%)
PDZ7_GRIP1-2-like 971..1056 CDD:467173 15/83 (18%)
Dlg1XP_038943945.1 L27_1 6..64 CDD:462665
MAGUK_N_PEST 107..223 CDD:431391 23/132 (17%)
PDZ1_Dlg1-2-4-like 222..310 CDD:467206 26/127 (20%)
PDZ2_Dlg1-2-4-like 319..403 CDD:467207 18/140 (13%)
PDZ_assoc 404..465 CDD:463164 17/139 (12%)
PDZ3_Dlg1-2-4-like 463..553 CDD:467257 29/127 (23%)
SH3_DLG1 582..648 CDD:212964 13/70 (19%)
Guanylate_kin 748..926 CDD:395500 34/216 (16%)
Blue background indicates that the domain is not in the aligned region.

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