DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and Dlg1

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_038943929.1 Gene:Dlg1 / 25252 RGDID:2505 Length:939 Species:Rattus norvegicus


Alignment Length:1099 Identity:189/1099 - (17%)
Similarity:342/1099 - (31%) Gaps:415/1099 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSFNGHHH----PPTDTA--LAPMLSVDRAMS-PAQSEDSGLAPERGTTYATITLPRNALHLAIT 95
            :.|..|.|    .||:..  .:|::.|..|:. ||:|              .:.||...      
  Rat   149 HGFVSHSHISPIKPTEAVPPSSPIVPVTPALPVPAES--------------PVVLPSTP------ 193

  Fly    96 FAERNDLSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACPAIVE 160
                 ..:.|||:                        ::|..|.....:|     |:||     :
  Rat   194 -----QANPPPVL------------------------VNTDSLETPTYVN-----GTDA-----D 219

  Fly   161 IEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP-------LIVTHVRPHGPVYK 218
            .||.                  :||:||.:..||.::.||.|.|       :.:|.:...|...:
  Rat   220 YEYE------------------EITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQ 266

  Fly   219 TGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEI 283
            .||::..|.:|||:...:...|.::|.:.:|..|              |:|:        |.::.
  Rat   267 DGRLRVNDCILRVNEADVRDVTHSKAVEALKEAG--------------SIVR--------LYVKR 309

  Fly   284 ERPMNDK------------LGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIAD 336
            .:|.::|            ||..:        |.|.|:      :.|.....:::..|:....|.
  Rat   310 RKPASEKIMEIKLIKGPKGLGFSI--------AGGVGN------QHIPGDNSIYVTKIIEGGAAH 360

  Fly   337 RCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKY 401
            :.|.|.:||::|:::...:|..  :.:|.:|.|..::...|.::                     
  Rat   361 KDGKLQIGDKLLAVNSVCLEEV--THEEAVTALKNTSDFVYLKV--------------------- 402

  Fly   402 SFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAES 466
                                |:.:|:.: |.....|..|..|..:...|.|.|..:|.       
  Rat   403 --------------------AKPTSMYI-NDGYAPPDITNSSSQSVDNHVSPSSYLGQ------- 439

  Fly   467 FPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAM 531
                                             .|.|.|          |...|:|....|....
  Rat   440 ---------------------------------TPASPA----------RYSPISKAVLGDDEIT 461

  Fly   532 RQLLEGGSSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHG-G 595
            |:                            |..||          |..|..|||.::.|...| |
  Rat   462 RE----------------------------PRKVV----------LHRGSTGLGFNIVGGEDGEG 488

  Fly   596 LVISDVKMGSPAHRSGSLRSGDILL---AVDQHPVQHFNVDALLKEEGRS--------------- 642
            :.||.:..|.||..||.||.||.::   :||.....|....|.||..|::               
  Rat   489 IFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRF 553

  Fly   643 -----------QNPSHSSSDFTTLTIKR--IVLPDFLPMSSPIYSNCPASGINLGMG--MGVSTS 692
                       .|.|.||...:..|.::  :.:...........|..|:.|:|...|  :.|..:
  Rat   554 EAKIHDLREQMMNSSVSSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINA 618

  Fly   693 TDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWST 757
            :|.:.:.:..||....:|.|.:     .|...||...:.|.|::|:..|.:..:.|....:....
  Rat   619 SDDEWWQARQVTPDGESDEVGV-----IPSKRRVEKKERARLKTVKFNSKTRGDKGQSFNDKRKK 678

  Fly   758 GVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSK 822
            .:.||.:....|         :::.|||..    :.:::.                     :|:.
  Rat   679 NLFSRKFPFYKN---------KDQSEQETS----DADQHV---------------------TSNA 709

  Fly   823 SSGSSLHQIIFTVRLE-PKGG----LLGITLAGSEDI--TKSITISGLVEGGIAHKNGQIHVGDQ 880
            |...|.:.|:.|.... .|||    :|.......:::  |:.:.|.|.::.         .|.|.
  Rat   710 SDSESSYLILITDEYGCSKGGQEEYVLSYEPVNQQEVNYTRPVIILGPMKD---------RVNDD 765

  Fly   881 LLA----------------IDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQA 929
            |::                ..::.|.|......||..|...|:.:.|.:.:....|..:....|:
  Rat   766 LISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLYGTSVQS 830

  Fly   930 IYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDG 994
            :.|..::                     |...:...||:...|:....||...::      :...
  Rat   831 VRAVAEK---------------------GKHCILDVSGNAIKRLQIAQLYPISIF------IKPK 868

  Fly   995 LYERGVFINRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMI 1053
            ..|..:.:|:..:...|     .|.|:|.:::.:..|:.|...:       .||.:|.|
  Rat   869 SMENIMEMNKRLTDEQA-----RKTFERAVRLEQEFTEHFTAIV-------QGDTLEDI 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 8/64 (13%)
PDZ_signaling 183..254 CDD:238492 22/77 (29%)
PDZ_signaling 278..375 CDD:238492 20/108 (19%)
PDZ 496..>521 CDD:294084 4/24 (17%)
PDZ_signaling 571..658 CDD:238492 31/116 (27%)
PDZ_signaling 832..913 CDD:238492 18/103 (17%)
PDZ_signaling 973..1055 CDD:238492 14/81 (17%)
Dlg1XP_038943929.1 PDZ_signaling 224..308 CDD:238492 25/105 (24%)
PDZ_signaling 317..403 CDD:238492 18/142 (13%)
PDZ_assoc 404..465 CDD:402299 17/139 (12%)
PDZ 463..547 CDD:214570 29/121 (24%)
SH3_DLG1 582..648 CDD:212964 13/70 (19%)
Guanylate_kin 748..926 CDD:395500 34/216 (16%)
L27_1 2..62 CDD:401120
MAGUK_N_PEST 106..223 CDD:402306 23/132 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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