DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and sprt

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster


Alignment Length:188 Identity:39/188 - (20%)
Similarity:69/188 - (36%) Gaps:51/188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   837 LEPKGGLLGITLAGSEDITKSITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLL 901
            ||..|.|  :|....|::.|.:..||..:..:..|........||   |:.....|.|.|..|.|
  Fly   258 LEINGRL--VTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQL---DQEKENNMRLQHRISYL 317

  Fly   902 QNLGDLVDLKILRSHDLANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGNS 966
            :.  .:.:|:.::.|      |..|.|   .:.|::.::|..|.:.:.:..|.|.:.        
  Fly   318 EE--QVRELQTVKEH------HPSQQQ---QQQQQQQQNPQQNPQQNPQQTSSNQSQ-------- 363

  Fly   967 GSGKPRVFHVTLYKDKVYDDYGFSVSDG---------LYERGVFINRIRSGGPADMCG 1015
                    |||          ..|:|..         :::||.:|..:..|.|.::.|
  Fly   364 --------HVT----------SISISSPPSTPPEKPLIFQRGNYITTLVGGKPIELMG 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492 19/75 (25%)
PDZ_signaling 973..1055 CDD:238492 11/52 (21%)
sprtNP_610683.1 PDZ <247..288 CDD:294084 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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