DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and Lrrc7

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001357710.1 Gene:Lrrc7 / 242274 MGIID:2676665 Length:1575 Species:Mus musculus


Alignment Length:833 Identity:161/833 - (19%)
Similarity:281/833 - (33%) Gaps:267/833 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 LDTSTGRGYTQMQIMPAHALARRGHTTLGSP---KYSF-STLESRKSSTAGRQRQRFARKSSLPL 429
            |:.||.|...:.::.|::..  :..|...||   :.:| |.||:..:::...:|:...::   |.
Mouse   861 LEQSTHRHTPETEVPPSNPW--QNWTRTPSPFEDRTAFPSKLETTPTTSPLPERKDHMKE---PT 920

  Fly   430 ENPACGTPG--------STGGSMGT--GGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGII--LS 482
            |.|...:||        :...|:|.  ..||           ||.:|...::..|.....:  |.
Mouse   921 ETPGPFSPGVPWEYHDPTPNRSLGNVFSQIH-----------CRPDSSKGVIAISKSTERLSPLM 974

  Fly   483 ETVSGSGGSGAVAIAQI---------VP----DSVADRSGCIQAGDRIVA-INKMYSLDAAAMRQ 533
            :.:..:....:.:|.:|         :|    .|.:|..|..:..|:.:. .:.|.|:..:....
Mouse   975 KDIKSNKFKKSQSIDEIDVGTYKVYNIPLENYASGSDHLGSHERPDKFLGPEHGMSSMSRSQSVP 1039

  Fly   534 LLEGGSSRNGASNGTP---ANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGG 595
            :|:......|:|.|.|   |:..:...:||.                           |.:..|.
Mouse  1040 MLDDEMLMYGSSKGPPQQKASMTKKVYQFDQ---------------------------SFNPQGA 1077

  Fly   596 LVISDVKMGSP--AHRSGSLRSGDILLAVD---------QHPVQHF--------NVDALLKEEGR 641
            :.:...|...|  ||.|..::.....:|.|         ..|::..        |.||::..:..
Mouse  1078 VEVKAEKRIPPPFAHNSEYVQQPSKNIAKDLVSPRAYRGYPPMEQMFSFSQPSVNEDAMVNAQFA 1142

  Fly   642 SQNP-------SHSSSDFTTLTI-KRIVLPDFLPMSSPIYSNCPASGINLGM-GMGVSTSTDHDL 697
            ||.|       :.|.:..|.:.: :|:..|..||.... |......|   |: |....:.||...
Mouse  1143 SQGPRAGFLRRADSLASSTEMAMFRRVSEPHELPPGDR-YGRATYRG---GLEGQSSISMTDPQF 1203

  Fly   698 YSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGS--GSNGGNQ---AANSWST 757
            ..    ..|:|.|        ..|.|           |.|:.::||  ..|...:   :|.|:||
Mouse  1204 LK----RNGRYED--------EHPSY-----------QEVKAQAGSFPAKNLTQRRPLSARSYST 1245

  Fly   758 ----GVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYA-----SVDCTALPPPMENKVY 813
                ...:|...|.|...:|..::|.:          |.|..|.     :.|....|.|::.:  
Mouse  1246 ESYGASQTRPVSARPTMAALLEKIPSD----------YNLGNYGDKTSDNSDIKTRPTPVKGE-- 1298

  Fly   814 GSAASSSSKSSGSSLHQIIFTV---RLEPKGGLLGITLAGSEDITKSITISGLVEGGIAHKNGQI 875
                .|..|.......|::..:   ||:........|          :.:..|..|||:    .:
Mouse  1299 ----ESCGKMPADWRQQLLRHIEARRLDRNAAYKHNT----------VNLGMLPYGGIS----AM 1345

  Fly   876 HVGD----QLLAIDEHSVQGMPL----SHATSLLQN---------------LG------DLVDLK 911
            |.|.    .|....:..:|.:||    |..:::|.|               ||      |.:..|
Mouse  1346 HAGRSMTLNLQTKSKFDLQDLPLQKTPSQQSNILDNGQEDVSPSGQWNPYPLGRRDVPPDTITKK 1410

  Fly   912 ILRSHDLANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGSGNAN----------------GGG 960
            .        |||: ||......:|.|.|        .::...||.|                ...
Mouse  1411 A--------GSHI-QTLMGSQSLQHRSR--------EQQPYEGNINKVTIQQFQSPLPIQIPSSQ 1458

  Fly   961 AVNG-------------NSGSGKPRVFHVTLYKDKVYDDYGFSVSDGL---------YERGVFIN 1003
            |..|             .|..|.|..|.|.:.|:   ...|||:|.|:         .::|:|:.
Mouse  1459 ATRGPQPGRCLIQTKGQRSMDGYPEQFCVRIEKN---PGLGFSISGGISGQGNPFKPSDKGIFVT 1520

  Fly  1004 RIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQR 1056
            |::..|||.  .||:|.|:|:|.|.......:....|.|:.:..:.:::::||
Mouse  1521 RVQPDGPAS--NLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQR 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 3/5 (60%)
PDZ 496..>521 CDD:294084 7/38 (18%)
PDZ_signaling 571..658 CDD:238492 18/113 (16%)
PDZ_signaling 832..913 CDD:238492 20/112 (18%)
PDZ_signaling 973..1055 CDD:238492 23/90 (26%)
Lrrc7NP_001357710.1 leucine-rich repeat 64..85 CDD:275380
LRR_8 85..140 CDD:338972
leucine-rich repeat 86..108 CDD:275380
leucine-rich repeat 109..131 CDD:275380
LRR 130..440 CDD:227223
leucine-rich repeat 132..177 CDD:275380
leucine-rich repeat 178..200 CDD:275380
leucine-rich repeat 201..223 CDD:275380
leucine-rich repeat 224..246 CDD:275380
leucine-rich repeat 247..269 CDD:275380
leucine-rich repeat 270..292 CDD:275380
leucine-rich repeat 316..336 CDD:275380
leucine-rich repeat 339..361 CDD:275380
leucine-rich repeat 362..384 CDD:275380
leucine-rich repeat 385..407 CDD:275380
leucine-rich repeat 408..430 CDD:275380
PDZ_signaling 1485..1570 CDD:238492 23/89 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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