DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and PDZD2

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_005248326.1 Gene:PDZD2 / 23037 HGNCID:18486 Length:2873 Species:Homo sapiens


Alignment Length:900 Identity:187/900 - (20%)
Similarity:323/900 - (35%) Gaps:244/900 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 YTNLTIEYDVSVV----QSVEFSMGPLLIEIERPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEK 317
            |..|....|.|.|    ...|..:..:.:..|....:.:||...|    :|..|........|:|
Human    45 YIQLNFAVDESTVPPDHSPPEMEICTVYLTKELGDTETVGLSFGN----IPVFGDYGEKRRGGKK 105

  Fly   318 IEESAG-------VFIASILPASIADRCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGR 375
            .:...|       :::..:...|.|.:.|.:.:.|::||::           .::|..:|.| |.
Human   106 RKTHQGPVLDVGCIWVTELRKNSPAGKSGKVRLRDEILSLN-----------GQLMVGVDVS-GA 158

  Fly   376 GYTQMQ--------IMPAHALARRGHTTLGSPKYSFS------TLE-SRKSSTAGRQRQRFARKS 425
            .|...|        ::.......:.|:|......:.|      ||| ..:::..|::.::|...|
Human   159 SYLAEQCWNGGFIYLIMLRRFKHKAHSTYNGNSSNSSEPGETPTLELGDRTAKKGKRTRKFGVIS 223

  Fly   426 SLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSG- 489
                ..||...|..:.||.|                |...|.|            .:|..:|.. 
Human   224 ----RPPANKAPEESKGSAG----------------CEVSSDP------------STELENGPDP 256

  Fly   490 --GSGAVAIAQIVPDSVADRSGC------IQAGDRIVAINKMYSLDAAAMRQLLEGGSSRNGASN 546
              |:|.|...:..|||:.:.:|.      :..|..    :::...||    .|......|..:..
Human   257 ELGNGHVFQLENGPDSLKEVAGPHLERSEVDRGTE----HRIPKTDA----PLTTSNDKRRFSKG 313

  Fly   547 GTPANWLELEIEFDMPDAVV--PASGVFSVKLLRAGKCGLGLSVSG------SSHGGLVISDVKM 603
            |        :.:|...|.:.  ....::.::||:... |||:.|||      |.| .:|::.||.
Human   314 G--------KTDFQSSDCLAREEVGRIWKMELLKESD-GLGIQVSGGRGSKRSPH-AIVVTQVKE 368

  Fly   604 GSPAHRSGSLRSGDILLAVDQH---PVQHFNVDALLKE-EGRSQ----NPSHSSSDFTTLTIKRI 660
            |..|||.|.|..||.||.::.|   .:.|....|:|:. .|..|    :..:|:.|...||.|. 
Human   369 GGAAHRDGRLSLGDELLVINGHLLVGLSHEEAVAILRSATGMVQLVVASKENSAEDLLRLTSKS- 432

  Fly   661 VLPDFLPMSSPIYSNCPASGINLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFR 725
             |||.                         ||:..|                 :.|.|...|...
Human   433 -LPDL-------------------------TSSVED-----------------VSSWTDNEDQEA 454

  Fly   726 VPSMDDASLQSVQLRSGSGSNGGNQAANSWSTGVNSRSYVAPPNTQSLTTELP------EEEDEQ 784
            ....|:.:..||| |:..|::.......:..:..|..|.....|...|.:.|.      |..:|.
Human   455 DGEEDEGTSSSVQ-RAMPGTDEPQDVCGAEESKGNLESPKQGSNKIKLKSRLSGGVHRLESVEEY 518

  Fly   785 EQMYPGYELNRYASVDCT------ALPPPMENKVYGSAASSS----SKSSGS-SLHQIIFTVRL- 837
            .::.......|...::.:      :||..:::    |:||..    .||:.| |..|:....|| 
Human   519 NELMVRNGDPRIRMLEVSRDGRKHSLPQLLDS----SSASQEYHIVKKSTRSLSTTQVESPWRLI 579

  Fly   838 -----------EPKGGLLGITLAGSEDITK---SITISGLVEGGIAHKNGQIHVGDQLLAIDEHS 888
                       :.||..||.::||..|..:   .|.:..:...|.|.::|::..||::|.::...
Human   580 RPSVISIIGLYKEKGKGLGFSIAGGRDCIRGQMGIFVKTIFPNGSAAEDGRLKEGDEILDVNGIP 644

  Fly   889 VQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGS 953
            ::|:....|....:.:...:.:..:|: .|.:.|..|.:...:   ..|..||:.||       |
Human   645 IKGLTFQEAIHTFKQIRSGLFVLTVRT-KLVSPSLTPCSTPTH---MSRSASPNFNT-------S 698

  Fly   954 GNANGGGAVNGNSGS-GK----PR---VFHVTLYKDKVYDDYGFSVSDGL---------YERGVF 1001
            |.|:.||:..|:|.| |:    |:   |..|||.|:.       .|..|:         ...|::
Human   699 GGASAGGSDEGSSSSLGRKTPGPKDRIVMEVTLNKEP-------RVGLGIGACCLALENSPPGIY 756

  Fly  1002 INRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQR 1056
            |:.:..|..|.|...|...|:|::||.:..:.           ||..|:..|:.:
Human   757 IHSLAPGSVAKMESNLSRGDQILEVNSVNVRH-----------AALSKVHAILSK 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 18/103 (17%)
PDZ 496..>521 CDD:294084 5/30 (17%)
PDZ_signaling 571..658 CDD:238492 33/100 (33%)
PDZ_signaling 832..913 CDD:238492 18/95 (19%)
PDZ_signaling 973..1055 CDD:238492 21/90 (23%)
PDZD2XP_005248326.1 PDZ_signaling 335..416 CDD:238492 29/82 (35%)
PDZ_signaling 589..670 CDD:238492 16/80 (20%)
PDZ_signaling 726..810 CDD:238492 21/92 (23%)
PDZ_signaling 2623..2694 CDD:238492
PDZ 2785..2867 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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