DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and Tamalin

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_620249.1 Gene:Tamalin / 192254 RGDID:70554 Length:394 Species:Rattus norvegicus


Alignment Length:293 Identity:63/293 - (21%)
Similarity:100/293 - (34%) Gaps:86/293 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 VTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIE--YDVSV- 268
            |..|....|....| :.|||.:..|:.:::.|....|...|||..|:|     |.:|  |..|: 
  Rat   134 VCRVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNV-----LRLETLYGTSIR 192

  Fly   269 -----------VQSVEFSMG---PLLIEIERPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIE 319
                       .|::....|   .|:::.:|.::   |||:              ..||..:.:|
  Rat   193 KAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVH---GLVV--------------KDPSIYDTLE 240

  Fly   320 E-SAGVFIASILPAS------IADRCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGY 377
            . .:.::.|.:||.|      :|...||.....:.....|..:.||.|.              |.
  Rat   241 SVRSCLYGAGLLPGSLPFGPLLAAPGGARGGSRRAKGDTDDAVYHTCFF--------------GG 291

  Fly   378 TQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGSTGG 442
            .:.|.:|......|.    ..|    .:.|:..|......|...:|.:|:     .|..||..||
  Rat   292 AEPQALPPPPPPARA----PGP----GSAETPASVLCPAPRATLSRSASV-----RCAGPGGGGG 343

  Fly   443 SMGTGGIHGS--------SSLGMGLGLCRAESF 467
                ||..|:        :..|.||...:..||
  Rat   344 ----GGAPGALWTEAREQALCGAGLRKTKYRSF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492 14/46 (30%)
PDZ_signaling 278..375 CDD:238492 19/103 (18%)
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
TamalinNP_620249.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
PDZ_signaling 99..184 CDD:238492 16/55 (29%)
Interaction with PSCD3. /evidence=ECO:0000250 180..257 19/98 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..318 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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