DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and C46H11.6

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_491502.1 Gene:C46H11.6 / 183523 WormBaseID:WBGene00016730 Length:342 Species:Caenorhabditis elegans


Alignment Length:231 Identity:51/231 - (22%)
Similarity:83/231 - (35%) Gaps:67/231 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 KPGDRLLRVDNVSLIG--------KTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQ----SVEFS 275
            ||.:.::|::..|::.        ..|..:.:|:|..| .||  |:: :|...:::    |||.:
 Worm    43 KPANEVIRINENSMVSFLSTNSFYNGLILSDKIVKVNG-ASG--NIS-KYQTELMKGETCSVEVT 103

  Fly   276 MGPLLIEIERPMNDKLGLVL-----CNYTAAVPASGSGSST------------------PSSGEK 317
            ....:|...|....|.|.||     |........|...|:|                  |||...
 Worm   104 RRKNIIPATRERLKKSGCVLRRDNTCFVIEVEKTSAMKSATVGVTVTYIQKRGIVTRIEPSSLAS 168

  Fly   318 IEESAGVFI-----ASILPAS-----IADRCGALSVGDQV-------LSIDDT-----MIEHTAF 360
            |....|..|     .|||.|.     |.::...:..|::|       :|::..     :||..|.
 Worm   169 IFFGRGDLIMDINEESILNAEKNDDFIREKLSGILKGEKVTFLVERPVSVESANTLRHLIESVAP 233

  Fly   361 SPDEVMTILDTSTGRGYTQM------QIMPAHALAR 390
            .||..|.......||..:.|      ::.|...|:|
 Worm   234 DPDVKMANDAICIGRNASNMHYNVLKKLQPKSILSR 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492 8/38 (21%)
PDZ_signaling 278..375 CDD:238492 30/141 (21%)
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
C46H11.6NP_491502.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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