DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and T19B10.5

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_505852.3 Gene:T19B10.5 / 179553 WormBaseID:WBGene00011833 Length:596 Species:Caenorhabditis elegans


Alignment Length:363 Identity:76/363 - (20%)
Similarity:127/363 - (34%) Gaps:94/363 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 VADRSGCIQAGDRIVAIN--KMYSLDAAAMRQLLEGGSSRNGASNGTPANWLELEIEFDMPDAVV 566
            |.|: ||    |...:||  ||..:|:..:::.:|...::...|           :||     :.
 Worm    78 VEDK-GC----DAPKSINKDKMTMIDSFKLKRKMEDSGTQKAYS-----------MEF-----LN 121

  Fly   567 PASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRSGDIL--LAVDQHPVQH 629
            ...|...|:|......|||.::.|:.:.|:.:.::.....|.:.|::..||.:  |.::...:.:
 Worm   122 EVEGKVGVQLRGVDIGGLGFNIQGNMNEGIFVKEIISKGIAEQCGNILVGDKIKSLTINFENMVY 186

  Fly   630 FNVDALLK-----------EEGRSQNPSHSSSD----------FTTLTIKRIVLPDFLPMSSPI- 672
            .:...||.           |...|.:.|.|.||          |.:.|:..:.......:|:|. 
 Worm   187 EDAVTLLSYSSPYKVKLELERKLSDSASVSDSDDDKEMRYHPLFRSNTLTHVHFNPLGTISTPTS 251

  Fly   673 YSNCPASGINLGMGMGVSTSTD----HDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDAS 733
            .:..|..          .||||    |.|.....:.......|....|:....|..|:.|.|..|
 Worm   252 IATTPQR----------CTSTDSKQKHALPPQREIIEPDSTTCADDNSQARDADNSRMDSSDYGS 306

  Fly   734 LQSVQLRSGSGSNGGNQAANSWSTGVNSRSYV-----------APPNTQSL--TTELPEEEDEQE 785
            ......|..:.|:|..:.       ::.|..|           .||..:.|  .||||.:..:..
 Worm   307 DGISDCRESTASDGTQKT-------LSDRIEVTDIIFDKVKSPTPPPLRKLEQCTELPPKPRKMV 364

  Fly   786 QMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSKS 823
            ...|. .:|:          ||...||  |.|:|..||
 Worm   365 SRSPS-PVNK----------PPPSPKV--SRATSPKKS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492
PDZ 496..>521 CDD:294084 5/16 (31%)
PDZ_signaling 571..658 CDD:238492 22/109 (20%)
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
T19B10.5NP_505852.3 PDZ 137..208 CDD:214570 13/70 (19%)
PTZ00449 <340..483 CDD:185628 18/63 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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