DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and mpz-4

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_500654.1 Gene:mpz-4 / 177255 WormBaseID:WBGene00019165 Length:402 Species:Caenorhabditis elegans


Alignment Length:241 Identity:47/241 - (19%)
Similarity:83/241 - (34%) Gaps:59/241 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 GALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQI---------MPAHALARRGHT 394
            ||:..||.:|.::.|.:   :|...::...:|.:||....|..:         .|.....|..|:
 Worm    93 GAILPGDIILQVNGTTV---SFDEKQLTEHVDETTGGASLQSNVKTVKRKPTTTPKTEPVRAPHS 154

  Fly   395 TLGSPKYSFSTLESRKSST-----AGRQRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSS 454
            .....|.....:.:.||.|     ..|.:.|.: .|.:|  |....|...|   :....::....
 Worm   155 LYPDFKVVVGKILNSKSETKITVLVARLKNRMS-TSKIP--NGILATQDHT---IDLAILYQFKY 213

  Fly   455 LGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVA 519
            |.:||.:.:.:.                          .|.:...:||||:..|  :..|:.|:|
 Worm   214 LQLGLNVQQVDR--------------------------KVVVNYTIPDSVSHCS--LNIGEAIIA 250

  Fly   520 INKMYSLDAAAMRQLLEGGSSRNGASNGTPANWLELEIEFDMPDAV 565
            ::.......|..||....|...||        |:.|.:|:...|.:
 Worm   251 VDDKPINTLADNRQRFREGFEANG--------WIRLLVEYPNTDPI 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 9/35 (26%)
PDZ 496..>521 CDD:294084 8/24 (33%)
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
mpz-4NP_500654.1 PDZ <81..130 CDD:381812 10/39 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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