DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and ZK849.1

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_493476.1 Gene:ZK849.1 / 173288 WormBaseID:WBGene00014100 Length:331 Species:Caenorhabditis elegans


Alignment Length:160 Identity:35/160 - (21%)
Similarity:63/160 - (39%) Gaps:40/160 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 IKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERP 286
            |:..:||||::.:.||.:                  .|.:...|.:.....::...|.|:.:.|.
 Worm   174 IEKENRLLRLNTLWLINR------------------INSSDLGDAAFENGDDWQSSPRLVILMRE 220

  Fly   287 -MNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIADRCGALSVGDQVLSI 350
             :|..|||.:        ..|.....|           |.:...|..|:||. ..|.|.|::|:|
 Worm   221 HINQGLGLEI--------TGGCDQFRP-----------VVVTGKLKRSMADD-DQLRVNDRILAI 265

  Fly   351 DDTMIEHTAFSPDEVMTILDTSTGRGYTQM 380
            |.|.:.:|. :..|||.:|:..:.:.:..:
 Worm   266 DGTFVTNTT-THAEVMEMLENESAKDFISL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492 7/31 (23%)
PDZ_signaling 278..375 CDD:238492 26/97 (27%)
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
ZK849.1NP_493476.1 PDZ_signaling 212..296 CDD:238492 26/104 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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