DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and F23C8.13

DIOPT Version :10

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_740810.2 Gene:F23C8.13 / 171799 WormBaseID:WBGene00017741 Length:244 Species:Caenorhabditis elegans


Alignment Length:140 Identity:31/140 - (22%)
Similarity:52/140 - (37%) Gaps:36/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 STIGLSNQKVMNMLCAGGSDACPAIVE--------IEYSLPECTVSQNSLCVTSKLAQITVERES 190
            |.|...:::.....|:..:|.    ||        :|.|:|..|...|                 
 Worm    17 SAISYDDEEPTTTKCSNDNDD----VEDGNIEKQILEISIPRDTEQPN----------------- 60

  Fly   191 GCLGLTLR--GGADYPLIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGH 253
               |:..|  |.....:.|.::.|..|  ::..::.||||||.:.:||...::.:|..|.:....
 Worm    61 ---GMAFRMVGSRSRGIFVDYIHPDSP--QSTHLREGDRLLRCNKISLRAVSVDQAASIFRFWMS 120

  Fly   254 VSGYTNLTIE 263
            .|....|.||
 Worm   121 RSDSLTLLIE 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ_canonical <96..163 CDD:483948 6/36 (17%)
PDZ2_GRIP1-2-like 180..265 CDD:467169 20/86 (23%)
PDZ3_GRIP1-2-like 277..384 CDD:467172
degP_htrA_DO <491..659 CDD:273938
PDZ_canonical 572..>623 CDD:483948
PDZ6_GRIP1-2-like 830..914 CDD:467171
PDZ7_GRIP1-2-like 971..1056 CDD:467173
F23C8.13NP_740810.2 PDZ_canonical 49..129 CDD:467153 23/101 (23%)
Blue background indicates that the domain is not in the aligned region.

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