DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and Dlg1

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_006521824.1 Gene:Dlg1 / 13383 MGIID:107231 Length:939 Species:Mus musculus


Alignment Length:1099 Identity:192/1099 - (17%)
Similarity:345/1099 - (31%) Gaps:415/1099 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSFNGHHH----PPTDTA--LAPMLSVDRAMS-PAQSEDSGLAPERGTTYATITLPRNALHLAIT 95
            :.|..|.|    .||:..  .:|::.|..|:. ||:|              |:.||        :
Mouse   149 HGFVSHSHISPIKPTEAVPPSSPIVPVTPALPVPAES--------------TVVLP--------S 191

  Fly    96 FAERNDLSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACPAIVE 160
            ..:.|.   |||:                        ::|..|.....:|     |:||     :
Mouse   192 APQANP---PPVL------------------------VNTDSLETPTYVN-----GTDA-----D 219

  Fly   161 IEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP-------LIVTHVRPHGPVYK 218
            .||.                  :||:||.:..||.::.||.|.|       :.:|.:...|...:
Mouse   220 YEYE------------------EITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAAQ 266

  Fly   219 TGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEI 283
            .||::..|.:|||:...:...|.::|.:.:|..|              |:|:        |.::.
Mouse   267 DGRLRVNDCILRVNEADVRDVTHSKAVEALKEAG--------------SIVR--------LYVKR 309

  Fly   284 ERPMNDK------------LGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIAD 336
            .:|.::|            ||..:        |.|.|:      :.|.....:::..|:....|.
Mouse   310 RKPASEKIMEIKLIKGPKGLGFSI--------AGGVGN------QHIPGDNSIYVTKIIEGGAAH 360

  Fly   337 RCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKY 401
            :.|.|.:||::|:::...:|..  :.:|.:|.|..::...|.::                     
Mouse   361 KDGKLQIGDKLLAVNSVCLEEV--THEEAVTALKNTSDFVYLKV--------------------- 402

  Fly   402 SFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAES 466
                                |:.:|:.: |.....|..|..|..:...|.|.|..:|.       
Mouse   403 --------------------AKPTSMYI-NDGYAPPDITNSSSQSVDNHVSPSSCLGQ------- 439

  Fly   467 FPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAM 531
                                             .|.|.|          |...|:|....|....
Mouse   440 ---------------------------------TPTSPA----------RYSPISKAVLGDDEIT 461

  Fly   532 RQLLEGGSSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHG-G 595
            |:                            |..||          |..|..|||.::.|...| |
Mouse   462 RE----------------------------PRKVV----------LHRGSTGLGFNIVGGEDGEG 488

  Fly   596 LVISDVKMGSPAHRSGSLRSGDILL---AVDQHPVQHFNVDALLKEEGRS--------------- 642
            :.||.:..|.||..||.||.||.::   :||.....|....|.||..|::               
Mouse   489 IFISFILAGGPADLSGELRKGDRIISVNSVDLRAASHEQAAAALKNAGQAVTIVAQYRPEEYSRF 553

  Fly   643 -----------QNPSHSSSDFTTLTIKR--IVLPDFLPMSSPIYSNCPASGINLGMG--MGVSTS 692
                       .|.|.||...:..|.::  :.:...........|..|:.|:|...|  :.|..:
Mouse   554 EAKIHDLREQMMNSSVSSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFRFGDILHVINA 618

  Fly   693 TDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWST 757
            :|.:.:.:..||....:|.|.:     .|...||...:.|.|::|:..|.:..:.|....:....
Mouse   619 SDDEWWQARQVTPDGESDEVGV-----IPSKRRVEKKERARLKTVKFNSKTRGDKGQSFNDKRKK 678

  Fly   758 GVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSK 822
            .:.||.:....|         :::.|||..    :.:::.                     :|:.
Mouse   679 NLFSRKFPFYKN---------KDQSEQETS----DADQHV---------------------TSNA 709

  Fly   823 SSGSSLHQIIFTVRLE-PKGG----LLGITLAGSEDI--TKSITISGLVEGGIAHKNGQIHVGDQ 880
            |...|.:.|:.|.... .|||    :|.......:::  |:.:.|.|.::.         .|.|.
Mouse   710 SDSESSYLILITDEYGCSKGGQEEYVLSYEPVNQQEVNYTRPVIILGPMKD---------RVNDD 765

  Fly   881 LLA----------------IDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQA 929
            |::                ..::.|.|......||..|...|:.:.|.:.:....|..:....|:
Mouse   766 LISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLYGTSVQS 830

  Fly   930 IYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDG 994
            :.|..::                     |...:...||:...|:....||...::      :...
Mouse   831 VRAVAEK---------------------GKHCILDVSGNAIKRLQIAQLYPISIF------IKPK 868

  Fly   995 LYERGVFINRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMI 1053
            ..|..:.:|:..:...|     .|.|:|.|::.:..|:.|...:       .||.:|.|
Mouse   869 SMENIMEMNKRLTEEQA-----RKTFERAMKLEQEFTEHFTAIV-------QGDTLEDI 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 10/64 (16%)
PDZ_signaling 183..254 CDD:238492 22/77 (29%)
PDZ_signaling 278..375 CDD:238492 20/108 (19%)
PDZ 496..>521 CDD:294084 4/24 (17%)
PDZ_signaling 571..658 CDD:238492 31/116 (27%)
PDZ_signaling 832..913 CDD:238492 18/103 (17%)
PDZ_signaling 973..1055 CDD:238492 15/81 (19%)
Dlg1XP_006521824.1 L27_1 2..62 CDD:370268
MAGUK_N_PEST 106..223 CDD:371162 25/132 (19%)
PDZ_signaling 224..308 CDD:238492 25/105 (24%)
PDZ_signaling 317..403 CDD:238492 18/142 (13%)
PDZ_assoc 404..465 CDD:371157 17/139 (12%)
PDZ 463..547 CDD:214570 29/121 (24%)
SH3_DLG1 582..648 CDD:212964 13/70 (19%)
Guanylate_kin 748..926 CDD:366206 35/216 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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