DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and Lrrc7

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001380603.1 Gene:Lrrc7 / 117284 RGDID:708527 Length:1542 Species:Rattus norvegicus


Alignment Length:833 Identity:161/833 - (19%)
Similarity:281/833 - (33%) Gaps:267/833 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 LDTSTGRGYTQMQIMPAHALARRGHTTLGSP---KYSF-STLESRKSSTAGRQRQRFARKSSLPL 429
            |:.||.|...:.::.|::..  :..|...||   :.:| |.||:..:::...:|:...::   |.
  Rat   828 LEQSTHRHTPETEVPPSNPW--QNWTRTPSPFEDRTAFPSKLETTPTTSPLPERKDHMKE---PT 887

  Fly   430 ENPACGTPG--------STGGSMGT--GGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGII--LS 482
            |.|...:||        :...|:|.  ..||           ||.:|...::..|.....:  |.
  Rat   888 ETPGPFSPGVPWEYHDPTPNRSLGNVFSQIH-----------CRPDSSKGVIAISKSTERLSPLM 941

  Fly   483 ETVSGSGGSGAVAIAQI---------VP----DSVADRSGCIQAGDRIVA-INKMYSLDAAAMRQ 533
            :.:..:....:.:|.:|         :|    .|.:|..|..:..|:.:. .:.|.|:..:....
  Rat   942 KDIKSNKFKKSQSIDEIDVGTYKVYNIPLENYASGSDHLGSHERPDKFLGPEHGMSSMSRSQSVP 1006

  Fly   534 LLEGGSSRNGASNGTP---ANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGG 595
            :|:......|:|.|.|   |:..:...:||.                           |.:..|.
  Rat  1007 MLDDEMLMYGSSKGPPQQKASMTKKVYQFDQ---------------------------SFNPQGA 1044

  Fly   596 LVISDVKMGSP--AHRSGSLRSGDILLAVD---------QHPVQHF--------NVDALLKEEGR 641
            :.:...|...|  ||.|..::.....:|.|         ..|::..        |.||::..:..
  Rat  1045 VEVKAEKRIPPPFAHNSEYVQQPGKNIAKDLVSPRAYRGYPPMEQMFSFSQPSVNEDAMVNAQFA 1109

  Fly   642 SQNP-------SHSSSDFTTLTI-KRIVLPDFLPMSSPIYSNCPASGINLGM-GMGVSTSTDHDL 697
            ||.|       :.|.:..|.:.: :|:..|..||.... |......|   |: |....:.||...
  Rat  1110 SQGPRAGFLRRADSLASSTEMAMFRRVSEPHELPPGDR-YGRAAYRG---GLEGQSSVSMTDPQF 1170

  Fly   698 YSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGS--GSNGGNQ---AANSWST 757
            ..    ..|:|.|        ..|.|           |.|:.::||  ..|...:   :|.|:||
  Rat  1171 LK----RNGRYED--------EHPSY-----------QEVKAQAGSFPAKNLTQRRPLSARSYST 1212

  Fly   758 ----GVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYA-----SVDCTALPPPMENKVY 813
                ...:|...|.|...:|..::|.:          |.|..|.     :.|....|.|::.:  
  Rat  1213 ESYGASQTRPVSARPTMAALLEKIPSD----------YNLGNYGDKTSDNSDIKTRPTPVKGE-- 1265

  Fly   814 GSAASSSSKSSGSSLHQIIFTV---RLEPKGGLLGITLAGSEDITKSITISGLVEGGIAHKNGQI 875
                .|..|.......|::..:   ||:........|          :.:..|..|||:    .:
  Rat  1266 ----ESCGKMPADWRQQLLRHIEARRLDRNAAYKHNT----------VNLGMLPYGGIS----AM 1312

  Fly   876 HVGD----QLLAIDEHSVQGMPL----SHATSLLQN---------------LG------DLVDLK 911
            |.|.    .|....:..:|.:||    |..:::|.|               ||      |.:..|
  Rat  1313 HAGRSMTLNLQTKSKFDLQDLPLQKTPSQQSNILDNGQEDVSPSGQWNPYPLGRRDVPPDTITKK 1377

  Fly   912 ILRSHDLANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGSGNAN----------------GGG 960
            .        |||: ||......:|.|.|        .::...||.|                ...
  Rat  1378 A--------GSHI-QTLMGSQSLQHRSR--------EQQPYEGNINKVTIQQFQSPLPIQIPSSQ 1425

  Fly   961 AVNG-------------NSGSGKPRVFHVTLYKDKVYDDYGFSVSDGL---------YERGVFIN 1003
            |..|             .|..|.|..|.|.:.|:   ...|||:|.|:         .::|:|:.
  Rat  1426 ATRGPQPGRCLIQTKGQRSMDGYPEQFCVRIEKN---PGLGFSISGGISGQGNPFKPSDKGIFVT 1487

  Fly  1004 RIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQR 1056
            |::..|||.  .||:|.|:|:|.|.......:....|.|:.:..:.:::::||
  Rat  1488 RVQPDGPAS--NLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVDLVIQR 1538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 3/5 (60%)
PDZ 496..>521 CDD:294084 7/38 (18%)
PDZ_signaling 571..658 CDD:238492 18/113 (16%)
PDZ_signaling 832..913 CDD:238492 20/112 (18%)
PDZ_signaling 973..1055 CDD:238492 23/90 (26%)
Lrrc7NP_001380603.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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