Sequence 1: | NP_572285.2 | Gene: | Grip / 50391 | FlyBaseID: | FBgn0029830 | Length: | 1058 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016872564.1 | Gene: | USH1C / 10083 | HGNCID: | 12597 | Length: | 956 | Species: | Homo sapiens |
Alignment Length: | 943 | Identity: | 187/943 - (19%) |
---|---|---|---|
Similarity: | 321/943 - (34%) | Gaps: | 262/943 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 116 HAADFLAPGD-----------RLHQIDGISTIGLSNQKVMN-----MLCAGGSDACPAIVEIEYS 164
Fly 165 LPECTVSQNSLCVTSKLAQITVER--ESGCLGLTLRGGADY--PLIVTHVRPHGPVYKTGRIKPG 225
Fly 226 DRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTN--------------LTIEY-DVSVVQS--VE 273
Fly 274 FSMGPLLIEIERPMN--DKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIAD 336
Fly 337 RCGALSVGDQVL---SIDDTMIEHTAFSPDEVMTILDTSTG------------------------ 374
Fly 375 --RGYTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTP 437
Fly 438 GSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGA--GIILSETVSGSGGSGAVAIAQIV 500
Fly 501 PDSVADRSGCIQAGDRIVAINK------MYSLDAAAMRQLLEGGSSRNGASNGT----PANWLEL 555
Fly 556 EIE---FDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRSGD 617
Fly 618 ILLAVDQ-------HPVQHFNVDALLKEEGRSQNPSH-SSSDFTTLTIKRIVLPDFLPMSSPIYS 674
Fly 675 NCPASGIN--------LGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYF----RVP 727
Fly 728 SMD-----------DASLQSVQLRSGSGSN------GGNQAANSWSTGVNSRSYVAPPNTQSLTT 775
Fly 776 ELPE-------EEDEQEQMYPGYELNRYASVDCTALPPPMENK--VYGSAASSSSKSSGSSLHQI 831
Fly 832 -IFT--------VRL--EPKGGLLGITLAGSED--ITKSITISGLVEGGIAHKNGQIHVGDQLLA 883
Fly 884 IDEHSVQGMPLSHATSLLQNL----GDLVDLKI 912 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grip | NP_572285.2 | PDZ | 82..147 | CDD:294084 | 9/46 (20%) |
PDZ_signaling | 183..254 | CDD:238492 | 19/74 (26%) | ||
PDZ_signaling | 278..375 | CDD:238492 | 26/127 (20%) | ||
PDZ | 496..>521 | CDD:294084 | 3/24 (13%) | ||
PDZ_signaling | 571..658 | CDD:238492 | 18/94 (19%) | ||
PDZ_signaling | 832..913 | CDD:238492 | 32/97 (33%) | ||
PDZ_signaling | 973..1055 | CDD:238492 | |||
USH1C | XP_016872564.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |