DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and dlg2

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_012813497.1 Gene:dlg2 / 100170164 XenbaseID:XB-GENE-940638 Length:855 Species:Xenopus tropicalis


Alignment Length:932 Identity:182/932 - (19%)
Similarity:313/932 - (33%) Gaps:250/932 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 NDLSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAG------GSDACPAI 158
            :||..|.:|       |.::     ..|.||:.:.  |...|..::.|.|.      .:|....|
 Frog    31 HDLKGPELV-------HVSE-----KNLSQIENVH--GYVMQSHISPLKASPAPIIVNTDTLDTI 81

  Fly   159 VEIEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP-------LIVTHVRPHGPV 216
            ..:.|: |....:.|...:..:..:||:||.:..||.::.||.|.|       :.:|.:.|.|..
 Frog    82 PYVSYT-PFHENAINGTEIEYEFEEITLERGNSGLGFSIAGGIDNPHVGDDPGIFITKIIPGGAA 145

  Fly   217 YKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLL- 280
            .:.||::..|.:|||:.|.:...:.:.|.:.:|..|              |:|:.......|:| 
 Frog   146 AEDGRLRVNDCILRVNEVDVSEVSHSRAVEALKEAG--------------SIVRLYVRRRRPILE 196

  Fly   281 --IEIERPMNDK-LGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIADRCGALS 342
              :||:.....| ||..:        |.|.|:      :.|.....:::..|:....|.:.|.|.
 Frog   197 TVVEIKLFKGPKGLGFSI--------AGGVGN------QHIPGDNSIYVTKIIDGGAAQKDGRLQ 247

  Fly   343 VGDQVLSIDDTMIEHT---------------------------------------AFSPDEVMTI 368
            |||::|.:::..:|..                                       ::||.....|
 Frog   248 VGDRLLMVNNYSLEEVTHEEAVAILKNTSDVVYLKVGKPTTIYMTDPYGPPDITHSYSPPLESHI 312

  Fly   369 LDT---------------STGRGYTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTAGRQR 418
            |.:               |.|| |:.   :|.|.|....:|....|.||.....:.|.||.....
 Frog   313 LSSANNGTLEYKSPLAPISPGR-YSP---IPKHMLVEDDYTRSPEPVYSTVNKLAEKPSTPRHFS 373

  Fly   419 QRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSE 483
            .....||.| |.:|   .|...||.|..            |.:.|.....:|...|.|.|.   .
 Frog   374 PVECDKSFL-LTSP---YPTFHGGLMSE------------LEISREPRKVILHKGSTGLGF---N 419

  Fly   484 TVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAMRQLLEGGSSRNGASNGT 548
            .|.|..|.| :.|:.|:....||.||.:|.||:|:::|                |....|||:..
 Frog   420 IVGGEDGEG-IFISFILAGGPADLSGELQRGDQIISVN----------------GIDLRGASHEQ 467

  Fly   549 PANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSL 613
            .|..|:                            |.||:|:                        
 Frog   468 AAAALK----------------------------GAGLTVT------------------------ 480

  Fly   614 RSGDILLAVDQHPVQHFNVDAL---LKEEGRSQNPSHSSSDFTTLTIKRIVLPDFLPMSSPIYSN 675
                  :.....|.::...:|.   |:|:..:.:.|..|....|...:.:.:...........|.
 Frog   481 ------IVAQYQPEEYARFEAKIHDLREQMMNHSMSSGSGSLRTNQKRSLYVRAMFDYEKSKDSG 539

  Fly   676 CPASGINLGMG--MGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQ 738
            .|:.|::...|  :.|..::|.:.:.:..||....::.:.:     .|...||...:.|.|::|:
 Frog   540 LPSQGLSFRYGDILHVINASDDEWWQARRVTQDGDSEEMGV-----IPSKRRVERKERARLKTVK 599

  Fly   739 LRSGSG--SNGGNQAANSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDC 801
            ..:..|  .:.|:.......:.:.||.:....|......|..:.|..||.....||......::.
 Frog   600 FNAKPGVIDSRGSFNDKRKKSFIFSRKFPFFKNKDQTEQETSDPERGQEDCILSYEPVTRQEINY 664

  Fly   802 T---ALPPPMENKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSEDITKSITISGL 863
            |   .:..||:::|.....|......||.:.......|.....|.....:|..|.:.|.|.....
 Frog   665 TRPVIILGPMKDRVNDDLISEFPDKFGSCVPHTTRPKRDYEMDGRDYHFVASREQMEKDIQEHKF 729

  Fly   864 VEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVD-LKILRSHDLANGSHLPQT 927
            :|.|        ...|.|......||:.:.......:|...|:.:. |::.:.:.:         
 Frog   730 IEAG--------QYNDNLYGTSVQSVKFVAERGKHCILDVSGNAIKRLQVAQLYPI--------- 777

  Fly   928 QAIYAKVQRRPRSPSANTEASK 949
             ||:.|    |:|..:..|.||
 Frog   778 -AIFLK----PKSVESLMEISK 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 10/46 (22%)
PDZ_signaling 183..254 CDD:238492 23/77 (30%)
PDZ_signaling 278..375 CDD:238492 25/154 (16%)
PDZ 496..>521 CDD:294084 10/24 (42%)
PDZ_signaling 571..658 CDD:238492 11/89 (12%)
PDZ_signaling 832..913 CDD:238492 15/81 (19%)
PDZ_signaling 973..1055 CDD:238492
dlg2XP_012813497.1 MAGUK_N_PEST 10..104 CDD:287565 17/87 (20%)
PDZ_signaling 105..189 CDD:238492 25/97 (26%)
PDZ_signaling 198..283 CDD:238492 18/98 (18%)
PDZ_assoc 285..353 CDD:287558 12/71 (17%)
PDZ 403..487 CDD:214570 29/161 (18%)
SH3_DLG2 519..592 CDD:212965 11/77 (14%)
Guanylate_kin 664..842 CDD:279019 30/153 (20%)
GuKc 675..842 CDD:214504 27/142 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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