DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and pdzk1

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_031752326.1 Gene:pdzk1 / 100145801 XenbaseID:XB-GENE-1013787 Length:621 Species:Xenopus tropicalis


Alignment Length:713 Identity:139/713 - (19%)
Similarity:230/713 - (32%) Gaps:262/713 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 KIE-ESAGVFIASILPASIADRCGALSVGDQVLSIDDTMI---EHTAFSPDEVMTILDTSTGRGY 377
            :|| :..|..:.|:.|.|.|::.| |..||:|:.::...:   ||.     ||:           
 Frog    25 RIERDEVGHLVRSVEPGSSAEKAG-LKDGDRVMKVNGKFVDDKEHA-----EVV----------- 72

  Fly   378 TQMQIMPAHALARRGHTTLGSPKYSFSTLE-SRKSSTAGRQRQRFARKSSLPLENPACGTPGSTG 441
                     ||.:...||:        ||| ..|::....:::...:.|:.|.:.|....||:. 
 Frog    73 ---------ALIKDSGTTV--------TLEVLDKTAYENTKKKEDNKNSNQPAKQPEAPQPGAQ- 119

  Fly   442 GSMGTGG-------------IHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGA 493
             .:..||             ..|:||.|..|...:.|:           ||.||           
 Frog   120 -PLANGGKALKRRPRLCYLIKEGNSSYGFSLKTTKCEN-----------GIFLS----------- 161

  Fly   494 VAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAA---AMRQLLEGG----------------S 539
                .:||:.:|.::| ::..|||:.:|.....|:.   ..:.|.|.|                .
 Frog   162 ----ALVPNGIAAKAG-VKDDDRIIEVNGKNVEDSTHDKLAKMLKESGGKIMFLVSDKATDEYFK 221

  Fly   540 SRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSV-SGSSHGGLVISDVKM 603
            |:..|.....||   :|:....|..|.          |:....|.|..: ...:..|..|.::..
 Frog   222 SQTMAITADKAN---VELLPSKPRTVE----------LKKDTNGYGFYLRQEKNRKGHFIMEIDS 273

  Fly   604 GSPAHRSGSLRSGDILLAVDQHPVQ---HFNVDALLKEEGRSQNPSHSSSDFTTLTIKRIVLPDF 665
            ||||.:: .|:..|.::||:...|:   |..|..::::.|          |.|||.|        
 Frog   274 GSPAEKA-KLQDYDRIVAVNGECVEAKDHEEVVKVIQKGG----------DKTTLLI-------- 319

  Fly   666 LPMSSPIYSNCPASGINLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMD 730
                                   ....|| ::||.|.|:...|                      
 Frog   320 -----------------------ADKKTD-EMYSLAGVSPYLY---------------------- 338

  Fly   731 DASLQSVQLRSGSGSNGGNQAANSWSTGVNSRS---YVAPPNTQSLTTELPEEEDEQEQMYPGYE 792
               ||..|   |...:...:.|......|.|::   .|||....::..:.||             
 Frog   339 ---LQETQ---GEIKSSSKEEATPAPAVVPSQTPTPTVAPAQPSAVEPKKPE------------- 384

  Fly   793 LNRYASVDCTALPP-------------PMENKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLL 844
                     |...|             ...|..||...::...:.|..::|::       |||..
 Frog   385 ---------TPAAPTGGQKHKPRLCKLQKGNNGYGFHLNAIKDTPGLFMNQVL-------KGGSA 433

  Fly   845 GITLAGSEDITKSITISGLVE-GGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLV 908
            .:....::|:        ||| .|:..:.....  |.|:.|.|  .:|:    .|.|:.:     
 Frog   434 DVAGIKNDDV--------LVEVNGVNMEKESYE--DVLIKIKE--TKGI----LTLLVAS----- 477

  Fly   909 DLKILRSHDLANGSHLPQTQAIYAKVQRRPRSPSANTEASKESGSGNANGGGAVNGNSGSGKP 971
                ..::|...|..:|.|.::...|.....|.||...||..|.:..|.....|..|.   ||
 Frog   478 ----QEAYDYFKGQKIPITASLADPVSEVSPSSSAAAPASTASKARAAPEPAEVQSNQ---KP 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 16/61 (26%)
PDZ 496..>521 CDD:294084 7/24 (29%)
PDZ_signaling 571..658 CDD:238492 21/90 (23%)
PDZ_signaling 832..913 CDD:238492 15/81 (19%)
PDZ_signaling 973..1055 CDD:238492
pdzk1XP_031752326.1 PDZ_signaling 7..87 CDD:238492 23/95 (24%)
PDZ_signaling 132..211 CDD:238492 22/105 (21%)
PDZ_signaling 241..320 CDD:238492 24/130 (18%)
gliding_GltJ <348..>390 CDD:411345 9/63 (14%)
PDZ 396..475 CDD:214570 19/101 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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