DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and dlg4

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_009300293.1 Gene:dlg4 / 100000823 -ID:- Length:805 Species:Danio rerio


Alignment Length:922 Identity:177/922 - (19%)
Similarity:280/922 - (30%) Gaps:372/922 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SYPP--VVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACP----AIVEI 161
            ||.|  .:..:.||     .|:.|........:||:..|...|:|.....||   |    |..||
Zfish    82 SYAPHTHISPIKPV-----LLSSGQTPLYTSAVSTLANSPPVVVNTDTLDGS---PYVNGAEGEI 138

  Fly   162 EYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP-------LIVTHVRPHGPVYKT 219
            ||.                  :||:||.:..||.::.||.|.|       :.:|.:.|.|...:.
Zfish   139 EYE------------------EITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQD 185

  Fly   220 GRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIE 284
            ||::..|.:|.|::|.:...|.::|.:.:|..|.:.....|..:.....|..::...||      
Zfish   186 GRLRVNDSILFVNDVDVREVTHSQAVEALKEAGAIVRLYVLRRKPIAEKVTELKLIKGP------ 244

  Fly   285 RPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPASIADRCGALSVGDQVLS 349
                ..||..:        |.|.|:      :.|.....:::..|:....|.:.|.|.:||::|:
Zfish   245 ----KGLGFSI--------AGGVGN------QHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILA 291

  Fly   350 IDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTA 414
            :::..:|       :||                   |      ...:|:.|           :||
Zfish   292 VNNVCLE-------DVM-------------------H------EDAVGALK-----------NTA 313

  Fly   415 GRQRQRFARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGI 479
            .....|.|:.::|.|.| ....|..|    .|...|..:.||                  |    
Zfish   314 EVVYLRVAKPNNLYLTN-NYNPPDLT----STYSPHLDTDLG------------------H---- 351

  Fly   480 ILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAMRQLLEGGSSRNGA 544
                                 |:.:|.                                      
Zfish   352 ---------------------PNFLAS-------------------------------------- 357

  Fly   545 SNGTPANWLELEIEFDMPDAVVPAS-GVFSVKL-----------------LRAGKCGLGLSVSGS 591
                           |.|.|:.|.| ..||..|                 :..|..|||.::.|.
Zfish   358 ---------------DYPQALTPTSPSRFSPVLHGLLGDDDLPRDPRRVVIHRGSTGLGFNIVGG 407

  Fly   592 SHG-GLVISDVKMGSPAHRSGSLRSGDILLA---VDQHPVQHFNVDALLKEEGRSQNPSHSSSDF 652
            ..| |:.||.:..|.||..||.||.||.:|:   ||.....|....|.||..|:           
Zfish   408 EDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRAATHEQAAAALKNAGQ----------- 461

  Fly   653 TTLTIKRIVLPDFLPMSSPIYSNCPA-------SGINLGMGMGVST---STDHDLYSSAYVTAGK 707
             |:||    :..:.|..   ||...|       ..:|..||.|.:|   :.....|..|.....|
Zfish   462 -TVTI----IAQYRPEE---YSRFEAKIHDLREQLMNSSMGSGTTTLRSNPKRGFYIRALFDYDK 518

  Fly   708 YADC------------------------------------------VSLKSRTPQPDYFRVPSMD 730
            .|||                                          :..|.|..:.::.|:.|.:
Zfish   519 TADCGFLSQAVGFRFGDVLHVLDCGDEEWWQACRVSPQGDEEEVGFIPSKRRVERKEWTRLKSKE 583

  Fly   731 -DASLQSVQLRSGSGSNGGNQAANSWSTGVNSRSYVAPP-----------NTQSLT--------- 774
             |.|..|:      ||.|..:...|:.|......:.|.|           |...|:         
Zfish   584 RDRSRDSI------GSQGREEPVRSYETVAQVEVHYARPIIILGPVKDRVNDDLLSEFPDKFGSC 642

  Fly   775 ---TELPEEEDE-----------QEQMYPGYELNRY------------ASVDCTALPPPMENK-- 811
               |..|:.|.|           :|||....:.:|:            .||.........:.|  
Zfish   643 VPHTTRPKREYEVDGRDYHFVSSREQMEKDIQNHRFIEAGQYNSHLYGTSVQSVREVAEQQGKHC 707

  Fly   812 VYGSAASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSED-----ITKSITI--------SGL 863
            :...:|::..:...:.||.|...||.:....:|.|....:|:     :.::|.:        |.:
Zfish   708 ILDVSANAVRRLQAAQLHPIAIFVRPKSLENVLEINTRLTEEQARKGMDRAIKLEQDFLECFSAI 772

  Fly   864 VEGG----IAHK 871
            |||.    :.||
Zfish   773 VEGDSFEEVYHK 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 12/45 (27%)
PDZ_signaling 183..254 CDD:238492 23/77 (30%)
PDZ_signaling 278..375 CDD:238492 17/96 (18%)
PDZ 496..>521 CDD:294084 2/24 (8%)
PDZ_signaling 571..658 CDD:238492 31/107 (29%)
PDZ_signaling 832..913 CDD:238492 12/57 (21%)
PDZ_signaling 973..1055 CDD:238492
dlg4XP_009300293.1 MAGUK_N_PEST 39..141 CDD:287565 19/66 (29%)
PDZ_signaling 142..226 CDD:238492 23/83 (28%)
PDZ 234..323 CDD:214570 26/155 (17%)
PDZ_assoc 334..389 CDD:287558 17/154 (11%)
DegQ <372..465 CDD:223343 29/104 (28%)
PDZ 388..471 CDD:214570 29/98 (30%)
SH3 507..572 CDD:302595 8/64 (13%)
Guanylate_kin 613..792 CDD:279019 31/172 (18%)
GuKc 624..792 CDD:214504 29/161 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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