DRSC/TRiP Functional Genomics Resources

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Protein Alignment ksh and AT5G20165

DIOPT Version :9

Sequence 1:NP_652499.2 Gene:ksh / 50363 FlyBaseID:FBgn0040890 Length:72 Species:Drosophila melanogaster
Sequence 2:NP_001318607.1 Gene:AT5G20165 / 832139 AraportID:AT5G20165 Length:91 Species:Arabidopsis thaliana


Alignment Length:72 Identity:32/72 - (44%)
Similarity:41/72 - (56%) Gaps:24/72 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTG-----------------------FMGT 42
            |||||||||.|:|:||:||||.||:..||::::: |||                       |.|.
plant     1 MSALFNFHSFLTVVLLVICTCTYLKMQFPAILEQ-KTGIVFCQIKDALSDFSAYCYFRLQMFRGF 64

  Fly    43 FWKLARI 49
            |||.|||
plant    65 FWKAARI 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kshNP_652499.2 DUF1242 <19..44 CDD:284305 12/47 (26%)
AT5G20165NP_001318607.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3808
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I2573
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1596132at2759
OrthoFinder 1 1.000 - - FOG0001976
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102262
Panther 1 1.100 - - LDO PTHR13229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3223
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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