DRSC/TRiP Functional Genomics Resources

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Protein Alignment ksh and tmem167a

DIOPT Version :9

Sequence 1:NP_652499.2 Gene:ksh / 50363 FlyBaseID:FBgn0040890 Length:72 Species:Drosophila melanogaster
Sequence 2:NP_001016167.1 Gene:tmem167a / 548921 XenbaseID:XB-GENE-943966 Length:72 Species:Xenopus tropicalis


Alignment Length:70 Identity:50/70 - (71%)
Similarity:61/70 - (87%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTGFMGTFWKLARIGERKSPWVGAACLIMA 65
            |||:|||.|||.|||||||||||||:|.|:|:|:||||.:|.|||.|||||||||:|...|::||
 Frog     1 MSAIFNFQSLLIVILLLICTCAYLRALVPNLLDKNKTGILGIFWKCARIGERKSPYVAVCCVVMA 65

  Fly    66 FTVLF 70
            |::||
 Frog    66 FSILF 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kshNP_652499.2 DUF1242 <19..44 CDD:284305 16/24 (67%)
tmem167aNP_001016167.1 DUF1242 <19..44 CDD:369105 16/24 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10362
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41626
Inparanoid 1 1.050 112 1.000 Inparanoid score I4728
OMA 1 1.010 - - QHG53568
OrthoDB 1 1.010 - - D1596132at2759
OrthoFinder 1 1.000 - - FOG0001976
OrthoInspector 1 1.000 - - oto103474
Panther 1 1.100 - - LDO PTHR13229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R639
SonicParanoid 1 1.000 - - X3223
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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