DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ksh and Tmem167a

DIOPT Version :10

Sequence 1:NP_652499.2 Gene:ksh / 50363 FlyBaseID:FBgn0040890 Length:72 Species:Drosophila melanogaster
Sequence 2:NP_001386611.1 Gene:Tmem167a / 100359823 RGDID:2323318 Length:72 Species:Rattus norvegicus


Alignment Length:70 Identity:51/70 - (72%)
Similarity:62/70 - (88%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTGFMGTFWKLARIGERKSPWVGAACLIMA 65
            |||:|||.|||:|||||||||||:|||.||::||||||.:|.|||.|||||||||:|...|::||
  Rat     1 MSAIFNFQSLLTVILLLICTCAYVRSLAPSILDRNKTGLLGIFWKCARIGERKSPYVAICCIVMA 65

  Fly    66 FTVLF 70
            |::||
  Rat    66 FSILF 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kshNP_652499.2 DUF1242 <19..44 CDD:462019 17/24 (71%)
Tmem167aNP_001386611.1 DUF1242 10..44 CDD:462019 25/33 (76%)

Return to query results.
Submit another query.