DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34401 and Zswim5

DIOPT Version :9

Sequence 1:NP_001356949.1 Gene:CG34401 / 50356 FlyBaseID:FBgn0085430 Length:2371 Species:Drosophila melanogaster
Sequence 2:XP_038965923.1 Gene:Zswim5 / 313524 RGDID:1310741 Length:1193 Species:Rattus norvegicus


Alignment Length:1483 Identity:331/1483 - (22%)
Similarity:487/1483 - (32%) Gaps:541/1483 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCSWSSEPESLCNNWRGWKKPAAGSGAGNGGLSGMGGMAVAGGSGAPPFGGAGASGSC-TPGGNG 80
            ||||   |....::.|| ...|||.|||.||                        ||| .||.. 
  Rat    22 LCSW---PSPQAHHPRG-TPGAAGGGAGGGG------------------------GSCLAPGAR- 57

  Fly    81 TAMANTSTCGRHYEVSTLAELAARCVASYIPFELVEHVYPPVPEQLQLRIAFWSFPDNEEDIRLY 145
                      .|.:..:|.:.||:.||....:|.||..:..:||.:|.||.:||||.||.:|.:|
  Rat    58 ----------PHLQPESLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMY 112

  Fly   146 SCL-------------------------------------------------------------- 148
            |..                                                              
  Rat   113 SSFQYRGGPGAGAAAGAAGASPVEEGPPPPPGAAAPAGSAPGAAGAGASPGLGAGTGAASGAGGG 177

  Fly   149 ANSSADE---FNRGDSLFRLRAVKDPLQIGFHLSASVVN----QTPRAYFNVAVTFDRRRISSCN 206
            :.|.:.|   |.||..|....:|::.||:|||||.:|..    ..|...:.||::|||.:|:|.:
  Rat   178 SGSGSGEGLPFRRGIRLLDSGSVENVLQVGFHLSGTVTEAATASEPAVTYKVAISFDRCKITSVS 242

  Fly   207 CTC-TSSAYWCSHVVAVCLHRIHCPQEVCLRAPVSESLTRLQRDQLQKFAQYLISELPQQILPTA 270
            |.| ....::|:||||:.|:||..|::|.||.|:||:|.::.|||||||.||||:....::||||
  Rat   243 CGCGNKDIFYCAHVVALSLYRIRKPEQVKLRLPISETLFQMNRDQLQKFIQYLITAHHTEVLPTA 307

  Fly   271 QRLLDELLSAQPTAINTVCGAPDPTAGASINDQTSWYLDEKTLHNNIKRILIKFCLPAPIVFSDV 335
            |:|.||:||:. :.||.|.|||||||||||:|:..|:|||:.:...:|..|           |..
  Rat   308 QKLADEILSSN-SEINQVNGAPDPTAGASIDDENCWHLDEEQVKEQVKLFL-----------SQG 360

  Fly   336 NYLTNSAPPAAAEWSSLLRPLRGREPEGMWNLLSIVREMYRRCDRNAVRLLEIITEECLYCDQIL 400
            .|..:                 |::...|:   :.||||.|..|.|..|:|.:|||:.:...::.
  Rat   361 GYYGS-----------------GKQLNSMF---AKVREMLRMRDSNGARMLTLITEQFMADPRLT 405

  Fly   401 IWWFQTKLALMMGSHGHSGGKHSNTHSNSTALQHACSSLCDEIVALWRLAALNPGLAPDERDMLH 465
            :|                       ....|::...|..|.||:.|||....|||....:|:....
  Rat   406 LW-----------------------RQQGTSMTDKCRQLWDELGALWVCIILNPHCKLEEKSCWL 447

  Fly   466 AQFTAW-HLKI--LDRVVKSRMMPSYTN------KHQQNSRSETELFIGFKPAIEACYLDWEGYP 521
            .|...| .|.|  |:.......:||.||      .|..:|.|.....: |..|||...|.|:...
  Rat   448 QQLQKWSDLDICPLEDGNYGHELPSITNALSQSASHSPDSLSRPRRTV-FTRAIEGRELHWQDSH 511

  Fly   522 IPGVTHTHDTNPIYYSPFTCFKHTDLKGESNNPGQLNATQALMSNNKHYNYFSSSSDHGMHAGAF 586
            :..:.    ::.||.:| .|.:.               .:.|:.|:           ||      
  Rat   512 LQRII----SSDIYTAP-ACQRE---------------NERLLFNS-----------HG------ 539

  Fly   587 KQRLDRPFRESRFYTNPADLDGGAALAGGGSGRFSTGLGSVAVGGAGAGGLGQMSGGVNNSVGGS 651
                           .|..|                                             
  Rat   540 ---------------QPLWL--------------------------------------------- 544

  Fly   652 AAAEVNPVQQQLPSGSAGVGASVTNAKVVVATDGNRSSASSEGFCENDDFGGDTSSSHNYCPPGQ 716
                     :.:|:..|.|                                 |...||.|     
  Rat   545 ---------EHVPTACARV---------------------------------DALRSHGY----- 562

  Fly   717 AVVPGQKSALTES-------DSQSSFDAVSHQSKD----------------EPPVGGVG-VAVGV 757
               |.:...||.:       ..|...:...||.|:                ..|:..:| :.:.:
  Rat   563 ---PKEALRLTVAIINTLRLQQQRQLEIYKHQKKELLQRGTTTITNLEGWVGHPLDPIGCLFLTL 624

  Fly   758 EQALSTSDTSSASSSSSSAS---------TASGSSNSSTSSMLMAGQEATVGVG-------GAVQ 806
            .:|...:|.|....|..:.|         .|||..:|:.|.:.:|.:.|.:|:|       |...
  Rat   625 TEACRLNDDSYMEMSDVNESRVPVYQHVPVASGCPSSNESYLSLALEVALMGMGQQRVMPEGLYA 689

  Fly   807 QTTRRLSKDESFSSSSDEFNQGGVGGSAGR---VAMASSGSGSGAGDTVAVGSGSTAGGDLTPVP 868
            | .:....:|...|...|...........|   :.:...|..||.|:.:...|        .|:.
  Rat   690 Q-DKVCRNEEQLLSQLQELQLDEELVQTLRKQCILLLEGGPFSGLGEVIHRES--------VPMH 745

  Fly   869 STSAAARAALAASSTGPVISASPHLAASAAGGLGVLGVGADQPCTSSAHAARALAAAVAASSDK- 932
            :.:....:||.           ||                 .|..|...|.||:...|..:|.. 
  Rat   746 TFAKYLFSALL-----------PH-----------------DPDLSYKLALRAMRLPVLENSSSA 782

  Fly   933 -----PHVFSNVRPTE-DAWDILLARAEGLHAHGH-GAEACILAVRLAEQMLANPPNLLLELPPA 990
                 ||...:|.|:. ..|..|          || .::.|.||                     
  Rat   783 SDPAHPHHRVSVVPSRYPRWLTL----------GHLESQQCELA--------------------- 816

  Fly   991 PKRKGKKQNVNPISHQLTVVASATLSKCAFLCTVLSENSEHYH---IGFRICLFALEMPRPPAST 1052
                         |..||.....||.    |.|:|....:|.|   :.|::...|.::..|..|:
  Rat   817 -------------STMLTAAKGDTLR----LRTILEAIQKHIHSSSLIFKLAQDAFKIATPTDSS 864

  Fly  1053 KPLEVKLANQEADILALLKRLPLGSAELQVIRERAEQLRSGTFKTRGEALLPINLATFI-FDALV 1116
                       ||...|...|.||   |||:|.....|   .::.|......:..||.: ..|||
  Rat   865 -----------ADSTLLNVALELG---LQVMRMTLSTL---NWRRREMVRWLVTCATEVGVRALV 912

  Fly  1117 TLSPLGGSTIVPGVASTSGVSSAAGKSMVNTGTRLLLYKHNSDESLGFDAAVAAL---------- 1171
            ::.....:...|    |...|..|..::.:|....|...:...|.|...|...||          
  Rat   913 SILQSWYTLFTP----TEATSIVAATAVSHTTILRLSLDYPQREELASCARTLALQCAMKDPQSC 973

  Fly  1172 GLKA-NVSEAEHPLLCEGTRRQRGDLALTLLSHYKDEPRKIAKIME----KLLDRDIHTLLNAPL 1231
            .|.| .:.|.:| :..|...:...|.|...::|  .:...||:.||    .|....:.:|..:.|
  Rat   974 ALSALTLCEKDH-IAFEAAYQIAIDAAAGGMTH--SQLFTIARYMELRGYPLRAFKLASLAMSHL 1035

  Fly  1232 LPAYYSSNPPVRTRSNQPTRREDHDYGGGSGCASSNCNPVANLCELLPADYGSVGGNSRPHSSTS 1296
            ..||           ||.|....:|...  .||.|:......|..|:|....||      |.:|.
  Rat  1036 NLAY-----------NQDTHPAINDVLW--ACALSHSLGKNELAALIPLVVKSV------HCATV 1081

  Fly  1297 AELELSMCALSMASSGSQSGGVQGMVPTTNAAGTTGTPS--SSSTTVSGSQNP 1347
            ....|..|                   |..|.|..|.|.  ||...:|..:.|
  Rat  1082 LSDILRRC-------------------TVTAPGLAGIPGRRSSGKLMSTDKAP 1115



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3615
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.