DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr12 and zig-2

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_510069.1 Gene:zig-2 / 192087 WormBaseID:WBGene00006979 Length:238 Species:Caenorhabditis elegans


Alignment Length:244 Identity:51/244 - (20%)
Similarity:90/244 - (36%) Gaps:65/244 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 INGDSKLDNN-----LDSSDSPMFEDSELMAHNTTVQLGGTAFLVCKVSGVDRVGVNWNQISWIR 118
            :|....:|:.     |||  .|:.:.:. ..:::.|..|....|.|..:|.....:.| :::.:|
 Worm    12 LNAAESVDHQKPIRALDS--QPLLKFTR-TPNDSNVTFGEKFVLSCGANGAPLPSIYW-ELNGMR 72

  Fly   119 RRD-------WHILSSGAQLYTNDERFAILHTPGSNMWTLQIKFVQRRDHGMYECQVSTPTGIIS 176
            .:.       .:||:.|.|:  ::......|        .:|.....|:.|.|:|.:......:.
 Worm    73 IQGEETSNVYENILNDGKQV--SNAAMVSSH--------YRIPCATARNSGAYKCIIDNGLTKLE 127

  Fly   177 HFVNLQVVVPEAFILGSG-------------ELHVDMGSTI--NLVCIIEKSPTPPQYVYWQKND 226
            |       |.:.|:.|:.             .:.||....|  |.|.:..:|.|..:: .|.|.:
 Worm   128 H-------VAKVFVGGNKTNCALNDNGAPFISMTVDFRLEISNNAVALSCRSETATEW-SWHKGE 184

  Fly   227 RLINYVDSRRDITIETTPGPRTQ----SRLIIREPQVTDSGNYTCSASN 271
            :|:            |..|.|.|    ..||||....:|.|.|.|:|.|
 Worm   185 QLL------------TNDGERYQMFPSGDLIIRNISWSDMGEYNCTARN 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 18/103 (17%)
Ig_3 193..271 CDD:404760 23/96 (24%)
Ig strand B 204..208 CDD:409353 2/5 (40%)
Ig strand C 219..223 CDD:409353 0/3 (0%)
Ig strand E 250..254 CDD:409353 1/3 (33%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
zig-2NP_510069.1 I-set 34..134 CDD:254352 19/118 (16%)
Ig 34..121 CDD:299845 17/98 (17%)
Ig <179..232 CDD:299845 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.