DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and zig-4

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_509335.1 Gene:zig-4 / 181051 WormBaseID:WBGene00006981 Length:253 Species:Caenorhabditis elegans


Alignment Length:114 Identity:27/114 - (23%)
Similarity:46/114 - (40%) Gaps:30/114 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 TGIISHFVNLQVVVP-EAFILGSGELHVDMGSTINLVCIIEKSPTPPQYVYWQKN---------- 225
            |..::....:::|.| |:.::..||       |..|.|.|  ..||...::|:.|          
 Worm    37 TNYLTSPAKIKIVAPLESALIPGGE-------TYQLRCDI--MSTPAATIHWKFNGKLIQGSNEL 92

  Fly   226 ---DRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYTCSASN 271
               ::|:|:..:..|..|       ..|.|.|:.|...:||.|:|...|
 Worm    93 NVEEKLLNFGKAIVDTGI-------VASILTIQCPSAENSGTYSCVGYN 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 1/10 (10%)
Ig_3 193..271 CDD:404760 22/90 (24%)
Ig strand B 204..208 CDD:409353 1/3 (33%)
Ig strand C 219..223 CDD:409353 0/3 (0%)
Ig strand E 250..254 CDD:409353 2/3 (67%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
zig-4NP_509335.1 I-set 47..147 CDD:254352 26/104 (25%)
Ig 65..144 CDD:143165 20/79 (25%)
IG_like 176..245 CDD:214653
Ig <193..238 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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