DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and igcm-2

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:354 Identity:66/354 - (18%)
Similarity:112/354 - (31%) Gaps:122/354 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PTLLLATTLEPDQKSILTDNDWKKLWMRGGINGDSKLDNNLDSSDSPMFEDS---ELMAHNTTVQ 90
            |.|.|:...|.|          |.|:....:|    ::.|..||....|..:   :|:..|.||.
 Worm   170 PVLTLSNLEEGD----------KGLYTCLAVN----IEGNSTSSIDVRFTKATILDLIPLNKTVI 220

  Fly    91 LGGTAFLVCKVSG-VDRVGVNW----------------------NQISWIRRRD--WHILSSGAQ 130
            .|...|..|..:. ...:..:|                      ..:..:|:.|  |:...:...
 Worm   221 EGSNVFWHCHANAQATAISYSWLFEKKPIKTTSLGLRSNIRSGDLSLQDVRKSDSGWYTCEAKNS 285

  Fly   131 LYTNDERFAILH---------------------------------TPGSNMWT------------ 150
            ........|.||                                 ||.|..|:            
 Worm   286 AGETTSSTAYLHVFYPPEPLSSHQPVQTVASGRNTTVSCDVIANPTPTSYTWSKNGHYLPTQASS 350

  Fly   151 -LQIKFVQRRDHGMYECQVSTPTG----IISHFVNLQVVVPEAF-ILGSGELHVDMGSTINLVCI 209
             :.|.:.:..|.|:|.||.....|    :.:|.:   |..|..| :....|:.|.:|..:::.|.
 Worm   351 HIIISYAKPGDGGIYGCQADNIAGKGSIVETHLI---VAEPPVFTVAPPSEIKVRLGDQVSIPCQ 412

  Fly   210 IEKSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYTCSASNT-E 273
            ....|.|  .|||.::.:.||                  ||.|..::.:..|.|.|.|..:|: |
 Worm   413 GFGDPMP--IVYWIRDKKRIN------------------QSTLTFKKVEHLDHGAYECVVANSVE 457

  Fly   274 PASIYVFVSKGDNMAAISRRKTSSADRLT 302
            ..|..|.:     :..|::.:.:|:.:.|
 Worm   458 TISTRVML-----LVEITKPQMASSIKFT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 25/171 (15%)
Ig_3 193..271 CDD:404760 18/77 (23%)
Ig strand B 204..208 CDD:409353 0/3 (0%)
Ig strand C 219..223 CDD:409353 2/3 (67%)
Ig strand E 250..254 CDD:409353 2/3 (67%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653
Ig 124..200 CDD:386229 10/43 (23%)
IG_like 214..298 CDD:214653 12/83 (14%)
Ig_3 309..371 CDD:372822 10/61 (16%)
Ig 389..467 CDD:386229 23/102 (23%)
FN3 476..548 CDD:238020 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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