DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and Dscaml1

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:241 Identity:56/241 - (23%)
Similarity:85/241 - (35%) Gaps:55/241 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LGGTAFLVCKVSGVDRVGVNWNQISWIRRRDWHILSSGAQLYTNDERFAILHTPG--------SN 147
            :|.|..|.|.::|.....:.|                    |.|.|    |..||        ||
Mouse   328 IGSTVILSCALTGSPEFTIRW--------------------YRNTE----LVLPGEAISIRGLSN 368

  Fly   148 MWTLQIKFVQRRDHGMYECQVSTPTGIISHFVNLQVVVPE----AFILGSGELHVDMGSTINLVC 208
            . ||.|...|:...|.|:|..:........|.   ::|.|    ..:....|..|:.|...:|:|
Mouse   369 E-TLLISSAQKSHSGAYQCFAT
RKAQTAQDFA---IIVLEDGTPRIVSSFSEKVVNPGEQFSLMC 429

  Fly   209 IIEKSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYTCSASNTE 273
            ..:.:|.|.  |.|..:|..:....|.|......:.| .|.|.:.:..||:.|.|.|.|:|.|: 
Mouse   430 AAKGAPPPT--VTWALDDEPVVRDGSHRTNQYTMSDG-TTISHMNVTGPQIRDGGVYRCTARNS- 490

  Fly   274 PASIYVFVSKGDNMAAISRRKTSSADRLTHIF----RSMLAPCLLL 315
                   |...:..|.|:.|...|...:.:|.    |..|..|.::
Mouse   491 -------VGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVI 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 22/99 (22%)
Ig_3 193..271 CDD:404760 22/77 (29%)
Ig strand B 204..208 CDD:409353 1/3 (33%)
Ig strand C 219..223 CDD:409353 1/3 (33%)
Ig strand E 250..254 CDD:409353 1/3 (33%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005 21/85 (25%)
Ig 408..498 CDD:353325 24/100 (24%)
IGc2 519..577 CDD:197706 3/11 (27%)
Ig 615..681 CDD:319273
Ig_DSCAM 707..785 CDD:143211
Ig 803..891 CDD:353325
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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