DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and si:ch211-264f5.6

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_002665524.2 Gene:si:ch211-264f5.6 / 100319064 ZFINID:ZDB-GENE-081104-208 Length:540 Species:Danio rerio


Alignment Length:315 Identity:57/315 - (18%)
Similarity:97/315 - (30%) Gaps:111/315 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TLLLATTLEPDQKSILTDNDWKKLWMRGGINGDSKLD--------NNLDSSDSPMF--------- 77
            ||.|..|.:.:..:.:.       |:..|:|..|...        |||:..:|..:         
Zfish   245 TLTLTCTADSNPPATIQ-------WVFNGVNLPSNAVSSPANFTLNNLEEKNSGNYTCVAYNAQT 302

  Fly    78 ------------------------EDSELMAHNTTVQLGGTAFLVCKVSGVDRVGVNWNQISWIR 118
                                    ..|.|:|.|:||.|  |.|     :...|.    ..:.|: 
Zfish   303 KRYIASRVAFVTVVESLSGTNISSSTSLLIAGNSTVNL--TCF-----AAAGRA----ETVEWV- 355

  Fly   119 RRDWHILSSGAQLYTNDERFAILHTPGSNMWTLQIKFVQRRDHGMYECQVSTPTGIISHFVNLQV 183
             :|...|:..:::..:.::.::           .|..|.:.|.|.|.|.:...........||::
Zfish   356 -KDGKPLNPDSRIVFSADKTSV-----------SIDKVVKEDRGEYRCLLRNKVNKDEASYNLKI 408

  Fly   184 VVPEAFILGSGELHVDMGSTINLVCIIEKSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRT 248
            ......:...|:..|.....:.|.|..|.  .||....|:.|...:|                .:
Zfish   409 NYGPEKVAVQGKHAVKFEDDVELSCTAES--VPPSTYTWKLNGTALN----------------SS 455

  Fly   249 QSRLIIREPQVTDSGNYTCSASNTEPASIYVFVSKGDNMAAISRRKTSSADRLTH 303
            |...:::..:..|||.|||.|.|              |:       |...|:.||
Zfish   456 QQVYVVKRAKDRDSGIYTCEAFN--------------NI-------TGKMDKTTH 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 18/96 (19%)
Ig_3 193..271 CDD:404760 18/77 (23%)
Ig strand B 204..208 CDD:409353 1/3 (33%)
Ig strand C 219..223 CDD:409353 0/3 (0%)
Ig strand E 250..254 CDD:409353 0/3 (0%)
Ig strand F 264..269 CDD:409353 3/4 (75%)
si:ch211-264f5.6XP_002665524.2 Ig 33..129 CDD:299845
IG_like 33..128 CDD:214653
Ig 130..222 CDD:299845
IG_like 149..222 CDD:214653
I-set 233..315 CDD:254352 12/76 (16%)
Ig_2 235..315 CDD:290606 12/76 (16%)
IGc2 335..398 CDD:197706 16/86 (19%)
Ig_2 427..494 CDD:290606 22/102 (22%)
IG_like 427..479 CDD:214653 17/83 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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