DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and dscam

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_031751619.1 Gene:dscam / 100216449 XenbaseID:XB-GENE-921689 Length:2039 Species:Xenopus tropicalis


Alignment Length:292 Identity:71/292 - (24%)
Similarity:111/292 - (38%) Gaps:68/292 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LEPDQK------SILTDNDWK--------KLWMRGG---INGDSKLDNNLDSSDSPMFEDSELMA 84
            ||||.:      .:|.:|...        ::|...|   :.|...:...|..:.||         
 Frog   265 LEPDSRFQHTVVGLLIENTRPSDSGSYVCEVWNNYGNAEVIGSLYVKQPLKVNISP--------- 320

  Fly    85 HNTTVQLGGTAFLVCKVSGVDRVGVNWNQISWIRRRDWHILSSGAQLYTNDERFAILHTPGSNMW 149
            ......:|....|.|.|:|.|...::|       .|:..|:::|     |:.|..     |.|..
 Frog   321 RKVKSSVGSQISLACSVTGTDDPDLSW-------YRNGEIINAG-----NNVRIT-----GVNRE 368

  Fly   150 TLQIKFVQRRDHGMYECQVSTPTGIISHFVNLQVVVPEA---FILGSGELHVDMGSTINLVCIIE 211
            ||.:..:.:.|.|.|:|.|.........:|  |||:.:.   .|....|..|..|..::|:|.::
 Frog   369 TLIMDGMAKSDSGAYQCFVRREKMSAQDYV--QVVLEDGTPKIISAFSEKVVSPGEPVSLMCNVK 431

  Fly   212 KSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYTCSASNTE--- 273
            .:|.|.  :.|..:|..|....:.|...:.|:.| ...|.|.|...||.|.|.|.|:|:|:.   
 Frog   432 GTPLPT--ITWTLDDDPIIKNGNHRISQLITSEG-NVVSYLNITNTQVRDGGVYRCTANNSAGVV 493

  Fly   274 ----------PASIYVFVSKGDNMAAISRRKT 295
                      ||||...    .|:.||:.|.|
 Frog   494 LYQARINVRGPASIRPM----KNITAIAGRDT 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 22/96 (23%)
Ig_3 193..271 CDD:404760 23/77 (30%)
Ig strand B 204..208 CDD:409353 1/3 (33%)
Ig strand C 219..223 CDD:409353 0/3 (0%)
Ig strand E 250..254 CDD:409353 2/3 (67%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
dscamXP_031751619.1 Ig 26..121 CDD:416386
Ig strand A' 33..37 CDD:409353
Ig strand B 40..49 CDD:409353
Ig strand C 55..61 CDD:409353
Ig strand C' 63..66 CDD:409353
Ig strand D 72..75 CDD:409353
Ig strand E 80..85 CDD:409353
Ig strand F 98..106 CDD:409353
Ig strand G 109..121 CDD:409353
Ig 124..217 CDD:416386
Ig strand A' 127..136 CDD:409353
Ig strand B 140..147 CDD:409353
Ig strand C 157..162 CDD:409353
Ig strand C' 164..167 CDD:409353
Ig strand D 172..176 CDD:409353
Ig strand E 179..185 CDD:409353
Ig strand F 193..201 CDD:409353
Ig strand G 205..217 CDD:409353
Ig strand A 225..228 CDD:409353
Ig strand A' 234..237 CDD:409353
IG_like 236..310 CDD:214653 9/44 (20%)
Ig strand B 242..249 CDD:409353
Ig strand C 255..260 CDD:409353
Ig strand C' 262..264 CDD:409353
Ig strand D 270..274 CDD:409353 0/3 (0%)
Ig strand E 276..280 CDD:409353 0/3 (0%)
Ig strand F 289..297 CDD:409353 0/7 (0%)
Ig strand G 300..310 CDD:409353 2/9 (22%)
Ig 313..395 CDD:416386 24/107 (22%)
Ig strand A 314..319 CDD:409353 1/4 (25%)
Ig strand A' 322..326 CDD:409353 0/3 (0%)
Ig strand B 329..339 CDD:409353 3/9 (33%)
Ig strand C 344..350 CDD:409353 1/12 (8%)
Ig strand C' 351..354 CDD:409353 0/2 (0%)
Ig strand E 368..374 CDD:409353 2/5 (40%)
Ig strand F 381..389 CDD:409353 4/7 (57%)
Ig 406..501 CDD:416386 25/97 (26%)
Ig strand A 406..409 CDD:409353 0/2 (0%)
Ig strand A' 415..419 CDD:409353 1/3 (33%)
Ig strand B 422..431 CDD:409353 2/8 (25%)
Ig strand C 436..442 CDD:409353 2/7 (29%)
Ig strand C' 444..447 CDD:409353 1/2 (50%)
Ig strand D 452..460 CDD:409353 1/7 (14%)
Ig strand E 464..473 CDD:409353 3/8 (38%)
Ig strand F 480..488 CDD:409353 4/7 (57%)
Ig strand G 491..501 CDD:409353 0/9 (0%)
Ig 504..593 CDD:416386 9/22 (41%)
Ig strand A 505..507 CDD:409353 1/1 (100%)
Ig strand A' 512..516 CDD:409353 1/3 (33%)
Ig strand B 519..526 CDD:409353 2/3 (67%)
Ig strand C 533..539 CDD:409353
Ig strand C' 540..542 CDD:409353
Ig strand D 549..553 CDD:409353
Ig strand E 557..563 CDD:409353
Ig strand F 571..579 CDD:409353
Ig strand G 583..593 CDD:409353
Ig 596..686 CDD:416386
Ig strand A 597..599 CDD:409353
Ig strand A' 604..608 CDD:409353
Ig strand B 611..620 CDD:409353
Ig strand C 625..632 CDD:409353
Ig strand C' 634..636 CDD:409353
Ig strand D 643..648 CDD:409353
Ig strand E 651..658 CDD:409353
Ig strand F 665..673 CDD:409353
Ig strand G 676..685 CDD:409353
Ig_DSCAM 689..784 CDD:409397
Ig strand B 707..711 CDD:409397
Ig strand C 720..724 CDD:409397
Ig strand E 749..753 CDD:409397
Ig strand F 763..768 CDD:409397
Ig strand G 777..780 CDD:409397
Ig_DSCAM 785..885 CDD:409398
Ig strand B 805..809 CDD:409398
Ig strand C 818..822 CDD:409398
Ig strand E 849..853 CDD:409398
Ig strand F 863..868 CDD:409398
Ig strand G 876..879 CDD:409398
FN3 886..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1093..1185 CDD:238020
FN3 1190..1279 CDD:238020
Ig_3 <1303..1364 CDD:404760
Ig strand B 1304..1311 CDD:409353
Ig strand C 1317..1322 CDD:409353
Ig strand C' 1327..1333 CDD:409353
Ig strand D 1337..1341 CDD:409353
Ig strand E 1343..1347 CDD:409353
Ig strand F 1356..1364 CDD:409353
Ig strand G 1367..1377 CDD:409353
FN3 1381..1471 CDD:238020
FN3 1497..1568 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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