DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and negr1

DIOPT Version :10

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_031755650.1 Gene:negr1 / 100127726 XenbaseID:XB-GENE-987949 Length:388 Species:Xenopus tropicalis


Alignment Length:274 Identity:63/274 - (22%)
Similarity:100/274 - (36%) Gaps:92/274 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NTTVQLGGTAFLVCKVSGVDRVGVNWNQISWIRRRDWHILSSGAQLYTNDERFAILHTPGSNMWT 150
            |..|:.|.||.|.|.:......|      :|:.|..  |:.:|...::.|.|.:|. |.....::
 Frog    48 NLVVRQGETAMLRCFLEEGASKG------AWLNRSS--IIFAGGDKWSVDPRVSIA-TSSKQEYS 103

  Fly   151 LQIKFVQRRDHGMYECQVSTPTGIISHFVNLQV-VVPEAFILGSGELHVDMGSTINLVCIIEKSP 214
            |:|:.|...|.|.|.|.|.|.....:..|:|.| |.|:.:.: |.::.|:.|:.::|:|:....|
 Frog   104 LRIQKVDVSDDGPYTCSVQTEHSPRTLQVHLTVHVSPKIYDI-SSDMTVNEGTNVSLICLATGKP 167

  Fly   215 TPP----------------QY--VYWQKNDRLINY-VDSRRDIT-----------------IETT 243
            .|.                ||  :|....|:..:| ..:..|::                 :|.|
 Frog   168 EPSISWRHISPSAKQFGSGQYLDIYGITRDQAGDYECSAENDVSFPDVKKVKVTVNFAPTILEIT 232

  Fly   244 P-------------------------------------GPRTQ---SRLIIREPQVTDS--GNYT 266
            |                                     |.|.|   :|.|:....||:.  ||||
 Frog   233 PTGVSLGRTGLIRCETAAVPAPVFEWYKGEKKLTNGQRGIRIQNYNTRSILTVSNVTEEHFGNYT 297

  Fly   267 CSASN---TEPASI 277
            |.|.|   |..||:
 Frog   298 CVAVNKLGTSNASL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG_like 86..183 CDD:214653 27/96 (28%)
Ig strand B 95..99 CDD:409353 2/3 (67%)
Ig strand C 109..117 CDD:409353 0/7 (0%)
Ig strand E 149..153 CDD:409353 1/3 (33%)
Ig strand F 163..168 CDD:409353 2/4 (50%)
Ig strand G 176..179 CDD:409353 0/2 (0%)
Ig_3 195..271 CDD:464046 28/153 (18%)
negr1XP_031755650.1 Ig 44..136 CDD:472250 27/96 (28%)
Ig strand B 57..61 CDD:409353 2/3 (67%)
Ig strand C 70..73 CDD:409353 1/8 (13%)
Ig strand E 102..106 CDD:409353 1/3 (33%)
Ig strand F 116..121 CDD:409353 2/4 (50%)
Ig strand G 129..132 CDD:409353 0/2 (0%)
Ig 146..222 CDD:472250 13/75 (17%)
Ig strand B 157..161 CDD:409301 1/3 (33%)
Ig strand C 170..174 CDD:409301 0/3 (0%)
Ig strand E 187..191 CDD:409301 2/3 (67%)
Ig strand F 201..206 CDD:409301 1/4 (25%)
Ig strand G 215..218 CDD:409301 0/2 (0%)
Ig_3 226..302 CDD:464046 16/75 (21%)

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