DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr12 and dscaml1

DIOPT Version :9

Sequence 1:NP_652462.3 Gene:dpr12 / 50320 FlyBaseID:FBgn0085414 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:301 Identity:68/301 - (22%)
Similarity:109/301 - (36%) Gaps:74/301 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DQKSILTDNDWKKLWMRGGINGDSKLDN--NLDSSDSPMFEDSELMAH--------------NTT 88
            |.:.:..|:.|.:. :.|....|.:|::  |.....:..|...|:..|              |..
Zfish   331 DGRPLPADSRWTRR-LTGLTISDLRLEDSGNYICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLK 394

  Fly    89 VQLGGTAFLVCKVSGVDRVGVNWNQISWIRRRDWHILSSGAQLYTNDERFAILHTPGSNMWTLQI 153
            ..:..|..|.|.|.|....     .:||.|         ..:....|:.|:|   .|::..||.|
Zfish   395 TGISSTVILSCAVQGSPHF-----TVSWFR---------NTEPIVPDQHFSI---QGAHNETLFI 442

  Fly   154 KFVQRRDHGMYEC-----------------QVSTPTGIISHFVNLQVVVPEAFILGSGELHVDMG 201
            ...|:|..|.|:|                 :..||. |:|.| :.:||.|              |
Zfish   443 TAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPR-IVSSF-SERVVAP--------------G 491

  Fly   202 STINLVCIIEKSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYT 266
            ...:|:|..:.:|.|.  :.|..:|..:.. ||....:..|.....|.|.:.:..||:.|.|.|.
Zfish   492 EPFSLMCAAKGAPPPT--ITWTLDDEPVAR-DSAHRASQYTLSDGSTVSHVNVTNPQIRDGGVYR 553

  Fly   267 CSASNTEPASIY---VFVSKGDNMAAISRRKTSSADRLTHI 304
            |:|.|:..::.|   :.| :|.......|..|:.|.|.|.|
Zfish   554 CAARNSAGSAEYQARINV-RGPPSIRAMRNITAVAGRNTFI 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr12NP_652462.3 IG 86..183 CDD:214652 26/113 (23%)
Ig_3 193..271 CDD:404760 19/77 (25%)
Ig strand B 204..208 CDD:409353 1/3 (33%)
Ig strand C 219..223 CDD:409353 0/3 (0%)
Ig strand E 250..254 CDD:409353 1/3 (33%)
Ig strand F 264..269 CDD:409353 2/4 (50%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653
Ig 112..183 CDD:143165
Ig 194..287 CDD:299845
I-set 302..380 CDD:254352 10/49 (20%)
IGc2 309..370 CDD:197706 7/39 (18%)
IGc2 399..458 CDD:197706 20/75 (27%)
I-set 477..571 CDD:254352 28/112 (25%)
Ig 477..567 CDD:299845 28/108 (26%)
IG_like 581..662 CDD:214653 6/13 (46%)
IGc2 588..646 CDD:197706 3/6 (50%)
Ig 684..751 CDD:143165
IG_like 686..756 CDD:214653
I-set 760..855 CDD:254352
Ig7_DSCAM 778..855 CDD:143211
IG_like 865..956 CDD:214653
Ig 873..963 CDD:299845
FN3 959..1053 CDD:238020
FN3 1060..1157 CDD:238020
FN3 1165..1271 CDD:238020
FN3 1276..1367 CDD:238020
IGc2 1392..1455 CDD:197706
FN3 1486..1559 CDD:238020
FN3 1573..1649 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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