DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32354 and Agrn

DIOPT Version :9

Sequence 1:NP_729380.1 Gene:CG32354 / 50302 FlyBaseID:FBgn0052354 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_017448655.1 Gene:Agrn / 25592 RGDID:2067 Length:2066 Species:Rattus norvegicus


Alignment Length:827 Identity:191/827 - (23%)
Similarity:277/827 - (33%) Gaps:325/827 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 RQDARPELSSTLMQAPGAAAAALES---LLREETEQQQLSQM------GRRNRASN--------- 158
            :::|.|   :|:....|:.|:...:   |.|.:..||:..::      |.|:..:|         
  Rat   200 KKNACP---ATVAPVCGSDASTYSNECELQRAQCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTC 261

  Fly   159 -------TGTGNCPRSCPPSITVGAE--PVCGSDGLIYANICELRKKTCSRSGVSLIKDVRDGCE 214
                   |.:..||.:|     .||.  .||||||:.|.:.|:|....|: |...:.|.....|:
  Rat   262 VPSADGQTASCLCPTTC-----FGAPDGTVCGSDGVDYPSECQLLSHACA-SQEHIFKKFNGPCD 320

  Fly   215 RSKG--SDCKH------------------RCSTEKDPVCGTDGRTYLNRC-MLRVQSCRVGLAAV 258
            ..:|  ||..|                  .|..:..|:||.||.||.|.| |.|:.:.| ||...
  Rat   321 PCQGSMSDLNHICRVNPRTRHPEMLLRPENCPAQHTPICGDDGVTYENDCVMSRIGATR-GLLLQ 384

  Fly   259 KLSHVGPCSNTSAVRESCPVD-------------CNSAPKDG---PVCSSDGNVYNSTCEMKLKT 307
            |: ..|.|.......|:|..:             |:....||   |||:.||:.||:.|..:...
  Rat   385 KV-RSGQCQTRDQCPETCQFNSVCLSRRGRPHCSCDRVTCDGSYRPVCAQDGHTYNNDCWRQQAE 448

  Fly   308 CGQ--------------------GV---------VKTSRKHCQSTRMCRESCWRVARPTCGSDGR 343
            |.|                    ||         ||..:..|:    |:..|..:..|.|||||.
  Rat   449 CRQQRAIPPKHQGPCDQTPSPCHGVQCAFGAVCTVKNGKAECE----CQRVCSGIYDPVCGSDGV 509

  Fly   344 LYASPCKMRSSNC--GKHVFEV----PLSYCMSQERHGA-------SDACPTECPKSDTDSSSQY 395
            .|.|.|::.|..|  |:.: :|    |...| .|.|.|:       ...||:||.:     |:|.
  Rat   510 TYGSVCELESMACTLGREI-QVARRGPCDPC-GQCRFGSLCEVETGRCVCPSECVE-----SAQP 567

  Fly   396 VCGSDGNIYSSLCELKMLNCGPQRKSIQKVSMDKCKNRLTRCKQLPPCKDFNSLFGSIFSSKR-- 458
            ||||||:.|:|.|||.:..|..| .|:...|...|:.          |.:....||::.|:.:  
  Rat   568 VCGSDGHTYASECELHVHACTHQ-ISLYVASAGHCQT----------CGEKVCTFGAVCSAGQCV 621

  Fly   459 --------NDKLCGTDAKTYNNECELAHATCLRGVNL--AHIGPCTDLNSPTKDCG--------- 504
                    ...:||:|..||.:.|||..|.|.:.|.:  ||.|||    .|. :||         
  Rat   622 CPRCEHPPPGPVCGSDGVTYLSACELREAACQQQVQIEEAHAGPC----EPA-ECGSGGSGSGED 681

  Fly   505 DACTR-------------------------ADLEQQPVCGSDGNTFASMCEFKRRTCDLR----- 539
            |.|.:                         ..:.:.|||||||.|:.:.|:.|:..|:.:     
  Rat   682 DECEQELCRQRGGIWDEDSEDGPCVCDFSCQSVPRSPVCGSDGVTYGTECDLKKARCESQQELYV 746

  Fly   540 -------------VVPVSLKNCALT-----------------ADCESDCDAQPPSFVCGSDNNLY 574
                         ::||:..:||.|                 |.|.|.|...|        :..|
  Rat   747 AAQGACRGPTLAPLLPVAFPHCAQTPYGCCQDNFTAAQGVGLAGCPSTCHCNP--------HGSY 803

  Fly   575 KSECHMRKENCGKHVFVVPLK--RCLAAF------------------------------QLKG-- 605
            ...|......|.....|..|:  ||...|                              |:.|  
  Rat   804 SGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLC 868

  Fly   606 ----------CAR------------------------------------------ICPREFEP-- 616
                      |.:                                          |||....|  
  Rat   869 SCRPGVAGPKCGQCPDGQVLGHLGCEADPMTPVTCVEIHCEFGASCVEKAGFAQCICPTLTCPEA 933

  Fly   617 ----VCGSDNKTYLNDCFLEIENCRANQTVNVNYYGACGRPEAPSTN 659
                |||||..||.|:|.|:...||....::....|.|.....|..:
  Rat   934 NSTKVCGSDGVTYGNECQLKAIACRQRLDISTQSLGPCQESVTPGAS 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32354NP_729380.1 KAZAL_FS 163..>200 CDD:294071 15/38 (39%)
KAZAL 220..266 CDD:197624 19/64 (30%)
KAZAL_FS 326..>359 CDD:294071 14/34 (41%)
KAZAL 380..430 CDD:197624 21/49 (43%)
KAZAL 452..493 CDD:197624 15/52 (29%)
KAZAL 502..>536 CDD:197624 14/67 (21%)
KAZAL_FS 553..597 CDD:294071 9/45 (20%)
KAZAL 606..650 CDD:197624 18/91 (20%)
AgrnXP_017448655.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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