DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32354 and smoc1

DIOPT Version :10

Sequence 1:NP_729380.1 Gene:CG32354 / 50302 FlyBaseID:FBgn0052354 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_012823493.1 Gene:smoc1 / 100145733 XenbaseID:XB-GENE-989094 Length:491 Species:Xenopus tropicalis


Alignment Length:483 Identity:95/483 - (19%)
Similarity:156/483 - (32%) Gaps:154/483 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 ERSKGSDCKHRCS-TEKDPVCGTDGRTYLNRCMLRVQSCRVGLAAVKLSHVGPCSNTSAVRESCP 277
            :|.:...|...|: .:..|||.:|||||.:.|..:...|:.  |.:.::|.|.|.:  |.:..|.
 Frog    36 DRDRDPQCNPHCTRPQHKPVCASDGRTYESMCDYQRAKCKD--ATLSVTHRGRCKD--AGQSKCR 96

  Fly   278 VDCNSA------PKDG---PVCSSDGNVYNSTCEMKLKTC------GQGVVKTSRKHCQSTRMCR 327
            ::...|      |::.   |.|:.||:.....|......|      |:.|..:|.::  .|.:|.
 Frog    97 LERTQALEQAKKPQEAVFIPECNEDGSFTQVQCHTFTGYCWCVTPDGKPVSGSSVQN--KTPVCS 159

  Fly   328 ESCWRVARPTC-GSDGRLY-------------ASPCKMRSSNCGKHVFEVPLSYCMSQERHGASD 378
            .|.  ..:|:. |:.||..             :.|.....|   :||||       ...|.|...
 Frog   160 GSV--TEKPSSQGNSGRRVSFRFFLTLNSDDGSKPTPTVES---RHVFE-------GDGRRGPHP 212

  Fly   379 ACPTECPKSDTDSSS---------------QYVCGSDGNIYSSLCELKMLNCGPQRKSIQKVSMD 428
            ....|...||..|.:               :::...|..:.||..:....:|..:|:|    :::
 Frog   213 ILRGEIQSSDHPSQNVGGGVIDITAPTLWIKHLVIKDAKLNSSSVKHPANSCDQERQS----ALE 273

  Fly   429 KCKNRLTRCKQLPPCKDFNSLFGSIF--------------------------SSKRNDKLCGTDA 467
            :.|........:|.|..     |.::                          |::....:|.:||
 Frog   274 EAKLNPRDGIVIPECAP-----GGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYETPVCESDA 333

  Fly   468 KTYNNECE-----LAHATCLRGVNLAHIGPCTD---------LNSPTKDCGDACTRAD----LEQ 514
            :..|.:.|     ...|.|..|..|..|....|         :||.....|...:..|    ||:
 Frog   334 RWKNTDAEDPFKDRELAGCPEGKKLEFITSLLDALTTDMVQAINSAAPAAGGRFSEPDPNHTLEE 398

  Fly   515 QPVC---------GSDGNTFASMCEFKRRTCDLRVVPVSLKNCALTADCESDCDAQPPSFVCGSD 570
            :.|.         ||:......|..|||.. ..:..|   |.||                     
 Frog   399 RVVLWYFSQLDSNGSEDINKKEMKPFKRYV-KKKAKP---KKCA--------------------- 438

  Fly   571 NNLYKSECHMRKENCGKHVFVVPLKRCL 598
             ..:...|.:.|:   |.:....||.||
 Frog   439 -RRFTDYCDLNKD---KSISFPELKGCL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32354NP_729380.1 KAZAL_FS 163..>200 CDD:412159
KAZAL 220..266 CDD:197624 15/46 (33%)
KAZAL_FS 326..>359 CDD:412159 8/46 (17%)
KAZAL 380..430 CDD:197624 10/64 (16%)
KAZAL 452..493 CDD:197624 11/71 (15%)
KAZAL 502..>536 CDD:197624 11/46 (24%)
KAZAL_FS 553..597 CDD:412159 5/43 (12%)
KAZAL 606..650 CDD:197624
smoc1XP_012823493.1 KAZAL_FS 47..87 CDD:238052 14/41 (34%)
Thyroglobulin_1 95..158 CDD:459665 13/64 (20%)
Thyroglob_assoc 159..257 CDD:435450 20/109 (18%)
Thyroglobulin_1 264..329 CDD:459665 8/73 (11%)
EFh_SPARC_SMOC1 352..466 CDD:320019 29/140 (21%)
EF-hand motif 397..429 CDD:320019 8/32 (25%)
EF-hand motif 434..466 CDD:320019 11/57 (19%)
Blue background indicates that the domain is not in the aligned region.

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