DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr6 and negr1

DIOPT Version :9

Sequence 1:NP_001287018.1 Gene:dpr6 / 50296 FlyBaseID:FBgn0040823 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:357 Identity:76/357 - (21%)
Similarity:126/357 - (35%) Gaps:99/357 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LPTAPTAAYTHPKWMEPYFDPSTPRNVTALMGKSAYLSCRVRNLANKTVSWIRHRDIHILTVGSY 121
            ||...|..||           ::..:|.:..|.:|.|.|.:.:..:|. :|:....  |:..|:.
Zfish    32 LPAGQTVDYT-----------TSSESVVSRQGDTALLRCYLLDGISKG-AWLNRSS--IIYAGND 82

  Fly   122 TYTSDQRFQ-ATHHQDTEDWTLQIKWAQKRDAGMYECQI-STQPVRSYFVRLNVVVPTATILGGP 184
            .::.|.|.. .::..|..:::|||:.....|.|:|.|.| |.:.:....::|.|.||........
Zfish    83 KWSGDPRVSIVSNVGDKHEYSLQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVKVPPKIYDISS 147

  Fly   185 DLHVDKGSTINLTCTVKFSPEPPAYIFWYH-HEEVINYDSSRGGVSVITEKGDVTTSFLLIQNAD 248
            |:.|::||.::|.|.....|||.  |.|.| ......|:|.               .:|.|....
Zfish   148 DITVNEGSNVSLICAASGKPEPK--ISWRHISPSARKYESG---------------EYLNITGIS 195

  Fly   249 LADSGKYSCAPSNADVAS-----VRV--------HVLNVRAIISGEHPEAMQTGSSGCQ------ 294
            ...:|.|.|...| |:||     |||        |.:....:..|      |.....|:      
Zfish   196 RDQAGDYECGAEN-DIASPDTKTVRVTVNFPPAIHEMKSHGVRPG------QVALLRCEAAAVPS 253

  Fly   295 --YNW-----------------------LTIVLL----LGLVLCYSSQQCSSAVPASLTSSLPLP 330
              :.|                       ||:..:    .|...|.:..:..:|     .:|:||.
Zfish   254 PVFEWYKGEKRINMGQGIVINNLSSRSVLTVKNMTQDRYGNYTCVAVNRLGTA-----NASVPLN 313

  Fly   331 SQLPLPAAAAATTTATGESASSESVTAARASA 362
                 |.....||:|....||:.::..:...|
Zfish   314 -----PIIEPTTTSAVSSPASNPAMYGSTGGA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr6NP_001287018.1 V-set 79..174 CDD:284989 22/96 (23%)
IG_like 80..175 CDD:214653 23/96 (24%)
IG_like 184..271 CDD:214653 26/100 (26%)
IGc2 191..262 CDD:197706 17/71 (24%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 19/81 (23%)
IG_like 44..136 CDD:214653 22/94 (23%)
I-set 140..222 CDD:254352 26/99 (26%)
IGc2 153..208 CDD:197706 17/71 (24%)
IG_like 236..312 CDD:214653 10/86 (12%)
IGc2 238..304 CDD:197706 8/71 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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