DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr6 and Lac

DIOPT Version :9

Sequence 1:NP_001287018.1 Gene:dpr6 / 50296 FlyBaseID:FBgn0040823 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster


Alignment Length:199 Identity:50/199 - (25%)
Similarity:77/199 - (38%) Gaps:32/199 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 MGKSAYLSCRVRNLANKTVSWIR-HRDIHILTVGSYTYTSDQRFQATHHQDTEDWTLQIKWAQKR 150
            :|.:....|.|:......|.::: ..|...|:.||.....|.||...:..::..:.||||..|:.
  Fly    42 IGGTVEFDCSVQYAKEYNVLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQET 106

  Fly   151 DAGMYECQ--ISTQPVRSYFVRLNVVVP-------TATILGGPDLHVDKGSTINLTCTVKFSPEP 206
            |||.|.||  |||....|..|:|:|..|       |.:::      ..:||.:.:.|.....|.|
  Fly   107 DAGTYTCQVVISTVHKVSAEVKLSV
RRPPVISDNSTQSVV------ASEGSEVQMECYASGYPTP 165

  Fly   207 PAYIFWYHHEEVINYDSSRGGVSVITEKGDVTTSFLLIQNADLADSGKYSCAPSN----ADVASV 267
            .  |.|......|          :.|:......:.|.|::....|.|.|.|...|    .|..::
  Fly   166 T--ITWRRENNAI----------LPTDSATYVGNTLRIKSVKKEDRGTYYCVADNGVSKGDRRNI 218

  Fly   268 RVHV 271
            .|.|
  Fly   219 NVEV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr6NP_001287018.1 V-set 79..174 CDD:284989 28/89 (31%)
IG_like 80..175 CDD:214653 29/90 (32%)
IG_like 184..271 CDD:214653 18/90 (20%)
IGc2 191..262 CDD:197706 16/74 (22%)
LacNP_523713.2 IG_like 36..131 CDD:214653 28/88 (32%)
FR1 37..50 CDD:409353 1/7 (14%)
Ig strand A' 37..42 CDD:409353 50/199 (25%)
Ig strand B 44..51 CDD:409353 0/6 (0%)
CDR1 51..59 CDD:409353 1/7 (14%)
Ig strand C 59..63 CDD:409353 1/3 (33%)
FR2 60..63 CDD:409353 1/2 (50%)
CDR2 67..81 CDD:409353 4/13 (31%)
Ig strand C' 68..72 CDD:409353 1/3 (33%)
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 12/30 (40%)
Ig strand D 84..90 CDD:409353 2/5 (40%)
Ig strand E 94..102 CDD:409353 3/7 (43%)
Ig strand F 108..115 CDD:409353 4/6 (67%)
CDR3 116..124 CDD:409353 3/7 (43%)
FR4 124..130 CDD:409353 2/5 (40%)
Ig strand G 124..130 CDD:409353 2/5 (40%)
Ig_3 134..208 CDD:404760 17/91 (19%)
Ig strand B 153..157 CDD:409353 0/3 (0%)
Ig strand C 166..170 CDD:409353 1/5 (20%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 2/4 (50%)
Ig strand G 215..218 CDD:409353 0/2 (0%)
Ig 227..318 CDD:416386
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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