Protein Alignment dpr6 and Lsamp

DIOPT Version :10

• Sequence 1: NP_001287018.1
• Gene: dpr6 / 50296
• FlyBaseID: FBgn0040823
• Length: 396
• Species: Drosophila melanogaster
• Sequence 2: NP_001401926.1
• Gene: Lsamp / 29561
• RGDID: 71102
• Length: 378
• Species: Rattus norvegicus
• Alignment Length: 322
• Identity: 80/322 - (24%)
• Similarity: 122/322 - (37%)
• Gaps: 57/322 - (17%)

  Fly    82 NVTALMGKSAYLSCRVRNLANKTVSWIRHRDIHILTVGSYTYTSDQRFQATHHQDTEDWTLQIKW 146
            |:|...|.:|.|.|.|.: .|..|:|:....  |:..|...::.|.|.:.......| ::|:|:.
  Rat    57 NITVRQGDTAILRCVVED-KNSKVAWLNRSG--IIFAGHDKWSLDPRVELEKRHALE-YSLRIQK 117

  Fly   147 AQKRDAGMYECQISTQ--PVRSYFVRLNVVVPTATILGGPDLHVDKGSTINLTCTVKFSPEPPAY 209
            ....|.|.|.|.:.||  |..|. |.|.|.||........|:.|::||.:.|.|.....|||  .
  Rat   118 VDVYDEGSYTCSVQTQHEPKTSQ-VYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEP--V 179

  Fly   210 IFWYHHEEVINYDSSRGGVSVITEKGDVTTSFLLIQNADLADSGKYSCAPSN----ADVASVRVH 270
            |.|.|             ::.:..:.:....:|.|.......||||.|..:|    |||..|:|.
  Rat   180 ITWRH-------------LTPLGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVT 231

  Fly   271 VLNVRAIISGEHPEAMQTGSSGCQYNWLTIVLLLGLVLCYSSQQC-SSAVPA----------SLT 324
            |.....|...:..||    ::|.|                :|.:| :|||||          .:.
  Rat   232 VNYPPTITESKSNEA----TTGRQ----------------ASLKCEASAVPAPDFEWYRDDTRIN 276

  Fly   325 SSLPLPSQLPLPAAAAATTTATGESASSESVTAARASAATTTTTTATRKRCPAVKSCRQTAG 386
            |:..|..:.....::...|..|.|...:.:..||.....|..:....::..|.|....|..|
  Rat   277 SANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTVPHPIQEIG 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dpr6	NP_001287018.1	FR1	79..96	CDD:409355	5/13 (38%)
		IG_like	80..175	CDD:214653	28/94 (30%)
		Ig strand A'	83..85	CDD:409355	0/1 (0%)
		Ig strand B	89..97	CDD:409355	3/7 (43%)
		CDR1	97..104	CDD:409355	2/6 (33%)
		FR2	105..114	CDD:409355	2/8 (25%)
		Ig strand C	105..110	CDD:409355	2/4 (50%)
		CDR2	115..129	CDD:409355	3/13 (23%)
		Ig strand D	129..135	CDD:409355	0/5 (0%)
		FR3	130..159	CDD:409355	7/28 (25%)
		Ig strand E	139..145	CDD:409355	1/5 (20%)
		Ig strand F	153..160	CDD:409355	3/6 (50%)
		IG_like	184..271	CDD:214653	25/90 (28%)
		Ig strand B	194..198	CDD:409353	1/3 (33%)
		Ig strand C	209..213	CDD:409353	1/3 (33%)
		Ig strand E	240..244	CDD:409353	1/3 (33%)
		Ig strand F	254..259	CDD:409353	3/4 (75%)
		Ig strand G	268..271	CDD:409353	1/2 (50%)
Lsamp	NP_001401926.1	Ig	55..145	CDD:472250	27/92 (29%)
		Ig strand B	66..70	CDD:409382	2/3 (67%)
		Ig strand C	78..82	CDD:409382	1/3 (33%)
		Ig strand E	111..115	CDD:409382	1/3 (33%)
		Ig strand F	125..130	CDD:409382	2/4 (50%)
		Ig strand G	138..141	CDD:409382	1/3 (33%)
		Ig_3	148..218	CDD:464046	20/84 (24%)
		Ig_3	235..311	CDD:464046	18/95 (19%)