DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr6 and Lsamp

DIOPT Version :9

Sequence 1:NP_001287018.1 Gene:dpr6 / 50296 FlyBaseID:FBgn0040823 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:322 Identity:80/322 - (24%)
Similarity:122/322 - (37%) Gaps:57/322 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NVTALMGKSAYLSCRVRNLANKTVSWIRHRDIHILTVGSYTYTSDQRFQATHHQDTEDWTLQIKW 146
            |:|...|.:|.|.|.|.: .|..|:|:....  |:..|...::.|.|.:.......| ::|:|:.
Mouse    71 NITVRQGDTAILRCVVED-KNSKVAWLNRSG--IIFAGHDKWSLDPRVELEKRHALE-YSLRIQK 131

  Fly   147 AQKRDAGMYECQISTQ--PVRSYFVRLNVVVPTATILGGPDLHVDKGSTINLTCTVKFSPEPPAY 209
            ....|.|.|.|.:.||  |..|. |.|.|.||........|:.|::||.:.|.|.....|||  .
Mouse   132 VDVYDEGSYTCSVQTQHEPKTSQ-VYLIV
QVPPKISNISSDVTVNEGSNVTLVCMANGRPEP--V 193

  Fly   210 IFWYHHEEVINYDSSRGGVSVITEKGDVTTSFLLIQNADLADSGKYSCAPSN----ADVASVRVH 270
            |.|.|             ::.:..:.:....:|.|.......||||.|..:|    |||..|:|.
Mouse   194 ITWRH-------------LTPLGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVT 245

  Fly   271 VLNVRAIISGEHPEAMQTGSSGCQYNWLTIVLLLGLVLCYSSQQC-SSAVPA----------SLT 324
            |.....|...:..||    ::|.|                :|.:| :|||||          .:.
Mouse   246 VNYPPTITESKSNEA----TTGRQ----------------ASLKCEASAVPAPDFEWYRDDTRIN 290

  Fly   325 SSLPLPSQLPLPAAAAATTTATGESASSESVTAARASAATTTTTTATRKRCPAVKSCRQTAG 386
            |:..|..:.....::...|..|.|...:.:..||.....|..:....::..|.|....|..|
Mouse   291 SANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTVPHPIQEIG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr6NP_001287018.1 V-set 79..174 CDD:284989 27/93 (29%)
IG_like 80..175 CDD:214653 28/94 (30%)
IG_like 184..271 CDD:214653 25/90 (28%)
IGc2 191..262 CDD:197706 18/74 (24%)
LsampXP_030104997.1 Ig 69..159 CDD:386229 27/92 (29%)
Ig_3 163..232 CDD:372822 19/83 (23%)
Ig_3 250..325 CDD:372822 18/94 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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