DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr6 and lrit3b

DIOPT Version :9

Sequence 1:NP_001287018.1 Gene:dpr6 / 50296 FlyBaseID:FBgn0040823 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:164 Identity:36/164 - (21%)
Similarity:55/164 - (33%) Gaps:33/164 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QGPIEGYNSLDDLLTTTPTPGQAALLLPTAPTAAYTHPKWMEPYFDPSTPRNVTALMGKSAYLSC 95
            :||......||..||.:     ..|.|...|..:....:...||...|..: :|||:|.:..|.|
Zfish   242 RGPESSLVLLDRFLTCS-----EPLDLAGVPFQSVELSRCRRPYVVTSATK-ITALLGSTVLLRC 300

  Fly    96 RVRNLANKTVSWIRHRDIHILTVGSYTYTSDQRFQATHHQDTEDW------------TLQIKWA- 147
            .........:.||:....::...|....|...       .|||.:            .:.::|: 
Zfish   301 EATGHPTPALMWIKSAKRNLYNQGCCKQTQSS-------LDTERFPKKLFGYVQESPRVGVRWSV 358

  Fly   148 ------QKRDAGMYECQISTQP-VRSYFVRLNVV 174
                  ...|||.|.|:..... :....|.||||
Zfish   359 VSLNGISYSDAGEYRCRAQNMAGISEAVVSLNVV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr6NP_001287018.1 V-set 79..174 CDD:284989 22/114 (19%)
IG_like 80..175 CDD:214653 24/115 (21%)
IG_like 184..271 CDD:214653
IGc2 191..262 CDD:197706
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470
leucine-rich repeat 69..89 CDD:275380
LRR_8 112..172 CDD:290566
leucine-rich repeat 114..137 CDD:275378
leucine-rich repeat 138..161 CDD:275378
LRR_8 160..214 CDD:290566
LRR_4 160..201 CDD:289563
leucine-rich repeat 162..185 CDD:275378
leucine-rich repeat 186..199 CDD:275378
leucine-rich repeat 215..230 CDD:275378
Ig 278..391 CDD:299845 24/120 (20%)
I-set 279..391 CDD:254352 24/119 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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