DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14104 and Swi5

DIOPT Version :9

Sequence 1:NP_652408.2 Gene:CG14104 / 50259 FlyBaseID:FBgn0040786 Length:68 Species:Drosophila melanogaster
Sequence 2:NP_001233590.1 Gene:Swi5 / 499779 RGDID:1559966 Length:89 Species:Rattus norvegicus


Alignment Length:86 Identity:26/86 - (30%)
Similarity:39/86 - (45%) Gaps:21/86 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ENKKKSRKTAN----KTNETSEGQKKKI----------------IELLHEYNDLKDATQRVLEAL 47
            |.::.:.:|.|    |..|..:...|:|                |.|||||||:||.:|.:|..|
  Rat     4 EGEEVTEETLNSDIQKLKEKQDMLDKEISQLIAEGYRVIELEQHISLLHEYNDIKDVSQMLLGKL 68

  Fly    48 ANLKCVPVGSVYATYNL-PRD 67
            |..:.|....:|..::| |.|
  Rat    69 AVTRGVTTKELYPDFDLNPND 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14104NP_652408.2 Swi5 <16..59 CDD:284474 18/58 (31%)
Swi5NP_001233590.1 Swi5 13..88 CDD:399800 22/74 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1553901at2759
OrthoFinder 1 1.000 - - FOG0006013
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107974
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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