DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX7C and cox-7C

DIOPT Version :9

Sequence 1:NP_001286268.1 Gene:COX7C / 50246 FlyBaseID:FBgn0040773 Length:66 Species:Drosophila melanogaster
Sequence 2:NP_492596.2 Gene:cox-7C / 3565338 WormBaseID:WBGene00009161 Length:84 Species:Caenorhabditis elegans


Alignment Length:70 Identity:24/70 - (34%)
Similarity:33/70 - (47%) Gaps:12/70 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GRSSVIARNFSQSMVRFSGHG-------GVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVR 60
            |.||     .|.|.|.::|.|       |.....|||.:|||:...|.......:||.:||::|.
 Worm    17 GHSS-----HSPSAVTYTGQGPNTFVNDGWASARLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVE 76

  Fly    61 HQLLK 65
            :||.|
 Worm    77 YQLRK 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX7CNP_001286268.1 Cyt_c_Oxidase_VIIc 20..65 CDD:238469 17/51 (33%)
cox-7CNP_492596.2 Cyt_c_Oxidase_VIIc <46..81 CDD:295484 14/34 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159963
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1642074at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106540
Panther 1 1.100 - - LDO PTHR13313
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.