DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosap and Pdzk1

DIOPT Version :9

Sequence 1:NP_610925.3 Gene:Prosap / 50225 FlyBaseID:FBgn0040752 Length:1871 Species:Drosophila melanogaster
Sequence 2:NP_113900.1 Gene:Pdzk1 / 65144 RGDID:70924 Length:523 Species:Rattus norvegicus


Alignment Length:557 Identity:115/557 - (20%)
Similarity:174/557 - (31%) Gaps:229/557 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   638 SGSSSTLL---------------------QQPHQSPSLS-----VASNG---SCQQP------LE 667
            ||:|.|||                     |.|.: |:|:     :..||   :|.||      .|
  Rat    78 SGNSVTLLVLDGDSYEKAVKHQVDLKELDQSPRE-PALNEKKPDLGMNGGVETCAQPRLCYLVKE 141

  Fly   668 SNEGGAS----------------------------------GNGINNRNNNH-SVGQYSSATAPR 697
            .|..|.|                                  .||.|..|.:| .|.:..:.:..|
  Rat   142 GNSFGFSLKTIQGKKGVFLTDITPQGVAMKAGVLADDHLIEVNGENVENASHEEVVEKVTKSGSR 206

  Fly   698 I---------------KKSAY-----------NAPRSVVLHRAKRGFGFILRGAKASSQLMQLRP 736
            |               :|:.:           :.||.||:.:...|:||.||..          |
  Rat   207 IMFLLVDKETARCHSEQKTPFKRETASLKLLPHQPRVVVIKKGSNGYGFYLRAG----------P 261

  Fly   737 SERFPALQYLDDVDPGGVADMAGLRPGDFLLTINGEDVTSASHEQVVEMIRSAGALVNLTVVSPQ 801
            .::.   |.:.|::||..|:.|||:..|.::.:|||.|.:..|:.||||||:.|....|.|:..:
  Rat   262 EQKG---QIIKDIEPGSPAEAAGLKNNDLVVAVNGESVEALDHDSVVEMIRNGGDQTTLLVLDKE 323

  Fly   802 FPHQMQASAQYLPSGARAGSHHLNSGPSTPQSSHRQCATLPRKMTGPGGSGPGSSSGGSVRMAPM 866
             ..::.:.|::.|                  ..:.|...||               .|||:.||.
  Rat   324 -ADRIYSLARFSP------------------LLYCQSQELP---------------NGSVKEAPA 354

  Fly   867 P---PRRDP--KTTLSVGRARAK--SMVAGLENGGEKEDDLPHTKSNSVESIATPTPTGI----- 919
            |   |...|  .||..||..:.|  .::        ||||......|::..    .|...     
  Rat   355 PISAPLEAPGSATTEDVGDHKPKLCRLI--------KEDDSYGFHLNAIRG----QPGSFVKEVQ 407

  Fly   920 QTGPGTPVQLRTASIKARPTSSRITAAELEELFQRQQGEGSAANASRYATMMTSSRFQSGTDSGA 984
            |.||.....|....|........:.....:.:.:|.:..|      .:.|:              
  Rat   408 QGGPADKAGLENEDIIIEVNGENVQDEPYDRVVERIKSSG------EHVTL-------------- 452

  Fly   985 ATPPASNGSPMRSGPLVYGSVAEMKRKTARSKHGSGTLRGKPVATPTVGPGGAGGGRDLKRFHST 1049
                           ||.|.||          :.....:..|:.:....|..||           
  Rat   453 ---------------LVCGKVA----------YSYFQAKKIPILSSLADPLVAG----------- 481

  Fly  1050 PDLHGPQLHGSASSIWQASGKGHHSQDDV--ATLHAS 1084
            ||..|...|.||.|...:|   |.::|..  |..|:|
  Rat   482 PDEKGETEHDSAESTKDSS---HPARDRTLSAASHSS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProsapNP_610925.3 FERM_f0 20..103 CDD:293120
Ank_2 128..222 CDD:289560
ANK 131..233 CDD:238125
ANK repeat 157..189 CDD:293786
ANK 186..312 CDD:238125
ANK repeat 191..222 CDD:293786
Ank_2 196..322 CDD:289560
ANK repeat 224..289 CDD:293786
ANK repeat 291..322 CDD:293786
ANK repeat 324..353 CDD:293786
SH3 532..586 CDD:302595
PDZ_signaling 706..798 CDD:238492 32/91 (35%)
Pdzk1NP_113900.1 PDZ_signaling 7..87 CDD:238492 6/8 (75%)
PDZ 132..212 CDD:214570 14/79 (18%)
PDZ_signaling 242..320 CDD:238492 31/90 (34%)
PDZ 375..455 CDD:214570 16/126 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..523 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.