DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosap and Cytip

DIOPT Version :9

Sequence 1:NP_610925.3 Gene:Prosap / 50225 FlyBaseID:FBgn0040752 Length:1871 Species:Drosophila melanogaster
Sequence 2:NP_001012086.1 Gene:Cytip / 311047 RGDID:1307990 Length:359 Species:Rattus norvegicus


Alignment Length:400 Identity:96/400 - (24%)
Similarity:153/400 - (38%) Gaps:95/400 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 SSSTLLQQPHQSPSLSVASNGS---CQQPLESNEGGASGNGINNRNNNHSVGQYSSATAPRIKKS 701
            |...||||.        :|||:   |.....|:....:|......|....:...:.||.||.:|.
  Rat     2 SLQRLLQQQ--------SSNGNLEYCADSAYSSYPTLTGPLTVEDNRRIQMLADTVATLPRGRKQ 58

  Fly   702 AYNAPRS------------VVLHRAKRG-FGFILRGAKASSQLMQLRPSERFPALQYLDDVDPGG 753
            ...|..|            |.:.:...| |||.::..:..:|  .:..||....:..:.:..|  
  Rat    59 LALARSSSLGDFSCSQRKVVTVEKQDNGTFGFEIQTYRLQNQ--NICSSEVCTMICKVQEDSP-- 119

  Fly   754 VADMAGLRPGDFLLTINGEDVTSASHEQVVEMIRSAGALVNLTVVSPQFPH---QMQASAQYLPS 815
             |..|||:.||....:||......:|:|||::|||:|.|:.:..::....|   :::|..|.|..
  Rat   120 -AHCAGLQVGDIFANVNGVSTEGFTHKQVVDLIRSSGNLLTIETLNGTMIHRRAELEAKLQTLKQ 183

  Fly   816 GARAGSHHLNSGPSTPQSSHRQCATLPRKMTGPGGSGPG--------SSSGGSVRMAPMPPRRDP 872
            ..:.....|       :|.|.|   ..|.:.|...:.|.        ||..|:: :.|.|...| 
  Rat   184 TLKKKWVEL-------RSLHLQ---EQRLLHGDAANSPNLENMNLDESSLFGNL-LGPSPAFLD- 236

  Fly   873 KTTLSVGRARAKSMVAGLENGGEKEDDLPHTKSNSVESIATPTPTGIQTGPGTPVQLRTASIKAR 937
            :..|| ..:..||.::.|.  .:.|||  :..|.|.:||                         |
  Rat   237 RPRLS-SESSCKSWLSSLT--VDSEDD--YGTSVSEDSI-------------------------R 271

  Fly   938 PTSSRITAAELEELFQRQQGEGSAANASRYATMMTSSRFQSGTDSGAATPP-ASNGSPMRSGPLV 1001
            ...||.|:.: :|.|..:.|:....|||     ...:|..|.|.||:.:|. .||.|.      |
  Rat   272 GAFSRQTSTD-DECFHSKDGDEILRNAS-----SRRNRSISITSSGSFSPLWESNYSS------V 324

  Fly  1002 YGSVAEMKRK 1011
            :|::....|:
  Rat   325 FGTLPRKSRR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProsapNP_610925.3 FERM_f0 20..103 CDD:293120
Ank_2 128..222 CDD:289560
ANK 131..233 CDD:238125
ANK repeat 157..189 CDD:293786
ANK 186..312 CDD:238125
ANK repeat 191..222 CDD:293786
Ank_2 196..322 CDD:289560
ANK repeat 224..289 CDD:293786
ANK repeat 291..322 CDD:293786
ANK repeat 324..353 CDD:293786
SH3 532..586 CDD:302595
PDZ_signaling 706..798 CDD:238492 27/104 (26%)
CytipNP_001012086.1 PDZ_signaling 76..161 CDD:238492 26/89 (29%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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