DRSC/TRiP Functional Genomics Resources

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Protein Alignment OTX2 and gsb

DIOPT Version :10

Sequence 1:NP_068374.1 Gene:OTX2 / 5015 HGNCID:8522 Length:297 Species:Homo sapiens
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:248 Identity:81/248 - (32%)
Similarity:111/248 - (44%) Gaps:67/248 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    44 RKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQ 108
            |||||.||||:..|:|.||.:||:|:|||::.|||:|....|.|:||||||.||||:.|:|...|
  Fly   183 RKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 247

Human   109 QNGGQNKVRPAKKKTSPAREVSSESGTSGQF--TPPSSTS-VPTIASSSAPVSIW---------- 160
            |                   |.|.:.||..|  ||.:|.: .|.:..|......|          
  Fly   248 Q-------------------VPSFAPTSTSFGATPTTSAAPAPNMGMSLYSSQSWPSSGAYENHA 293

Human   161 ----SPASISPLSDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFG-GMDCGSYLTPMHHQL 220
                |.||:||.|....|||:    ::....|||.....|....||.:| |....:|        
  Fly   294 AYGGSVASMSPASSTSGTSSA----AHSPVQTQAQQPGTGSEFMTSTYGVGSSNATY-------- 346

Human   221 PGPGATLSPMGTNAVTSHLNQSPAS----LSTQGYGASSLGFN--STTDCLDY 267
              |.|..|          :.|:||:    |.:|...|::.|.:  ||.|..::
  Fly   347 --PSAAYS----------MPQTPATSAEQLRSQFASAAASGSHHPSTWDSYNF 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OTX2NP_068374.1 Homeodomain 47..102 CDD:459649 32/54 (59%)
TF_Otx 161..242 CDD:427350 21/81 (26%)
gsbNP_523863.1 PAX 19..143 CDD:128645
Homeodomain 186..242 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

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