DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30158 and Rap1a

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001005765.1 Gene:Rap1a / 295347 RGDID:1359694 Length:184 Species:Rattus norvegicus


Alignment Length:179 Identity:59/179 - (32%)
Similarity:95/179 - (53%) Gaps:14/179 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LERIRLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFP 68
            :...:||:||..|||||::..:|:...:.:||..|:||.|.::.::......::||||:|..||.
  Rat     1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFT 65

  Fly    69 AMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDFQDIPIVIAGNKADLATTHREVKL 133
            |||.|.:.....|.|||:.|:..:|..::...|:|...: |.:|:|:::.|||.|| ...|.|..
  Rat    66 AMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK-DTEDVPMILVGNKCDL-EDERVVGK 128

  Fly   134 EE----VTDWVFCELPRLRAKVLECSAKEDSNVTDLFKSLL-SLSRFLP 177
            |:    ...|..|..       ||.|||...||.::|..|: .::|..|
  Rat   129 EQGQNLARQWCNCAF-------LESSAKSKINVNEIFYDLVRQINRKTP 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 57/168 (34%)
Rap1aNP_001005765.1 Rap1 3..167 CDD:133375 57/172 (33%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)

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