DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30158 and ssr-2

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_508490.4 Gene:ssr-2 / 191965 WormBaseID:WBGene00006055 Length:335 Species:Caenorhabditis elegans


Alignment Length:301 Identity:99/301 - (32%)
Similarity:156/301 - (51%) Gaps:55/301 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERIRLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFPA 69
            ||.|||:||.|.|||::|::|:|:..::.||:.|:|||::||:.:.||.|.:|||||  :..||.
 Worm    19 ERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDT--NFNFPD 81

  Fly    70 MRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDFQDIPIVIAGNKADLATTHREVKLE 134
            |||||||:|.||:||::.....||:.:...::||..:|.|..::|||:.|||.|:    ...|:.
 Worm    82 MRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDV----ENKKIY 142

  Fly   135 EVTDWVFCELPRLRAKVLECSAKEDSNVTDLFKSLLSLSRFLPASSSGSGGSGGGGE-----AAP 194
            |.|...|........:.:|.|||::..:||:|::||.||.| |...:|.|......|     ::|
 Worm   143 EETAKAFTNRLSSDVRYIEVSAKDNIRITDVFRTLLELSGF-PRCKAGGGRLDDVAEDEETRSSP 206

  Fly   195 SGFKRRSSAYVSASSSRNKNRMNSPALGGAGGSGGDKKGSSLVDAVDVATT---SAEAKLKP--- 253
            |   .|.||.|.|.|:..:                |.:.:.:.|..:.|:|   |..|:.:|   
 Worm   207 S---IRRSATVRAKSTTRR----------------DPRKTLMEDEKNTASTKNGSQSAREQPQLD 252

  Fly   254 ------------------RSRSLIRRASRKTKQQINNASDD 276
                              |:.||..::.|:.|:|:.....|
 Worm   253 KQASHPVLAVPLHIGDLKRNLSLRMKSPRRDKEQVERKLSD 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 68/163 (42%)
ssr-2NP_508490.4 P-loop containing Nucleoside Triphosphate Hydrolases 22..178 CDD:476819 66/161 (41%)

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