DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30158 and let-60

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_502213.3 Gene:let-60 / 178104 WormBaseID:WBGene00002335 Length:184 Species:Caenorhabditis elegans


Alignment Length:168 Identity:56/168 - (33%)
Similarity:92/168 - (54%) Gaps:17/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFPAMRR 72
            :||::|..|||||::..:.:...:.::|..|:||.|.::..:.|.|..:|||||:|..::.|||.
 Worm     5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 69

  Fly    73 LSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDFQDIPIVIAGNKADLATTHREVKLEEVT 137
            ..:.|...|:||:|...|.||:.|....|:||..: |..|:|:|:.|||.||::  |.|....|:
 Worm    70 QYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVK-DSDDVPMVLVGNKCDLSS--RSVDFRTVS 131

  Fly   138 DWVFCELPRLRAK-----VLECSAKEDSNVTDLFKSLL 170
            :         .||     .::.|||....|.:.|.:|:
 Worm   132 E---------TAKGYGIPNVDTSAKTRMGVDEAFYTLV 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 56/168 (33%)
let-60NP_502213.3 H_N_K_Ras_like 3..164 CDD:133338 56/168 (33%)

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