DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30158 and rap-1

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_501549.1 Gene:rap-1 / 177709 WormBaseID:WBGene00004307 Length:188 Species:Caenorhabditis elegans


Alignment Length:185 Identity:59/185 - (31%)
Similarity:101/185 - (54%) Gaps:9/185 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LERIRLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFP 68
            :...::|:||..|||||::..:|:...:.:||..|:||.|.::.::.|....::||||:|..||.
 Worm     1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65

  Fly    69 AMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDFQDIPIVIAGNKADLATTHREVKL 133
            |||.|.:.....|:|||:.|:..:|..:....::|...: |..::|:::.|||.|| ...|.|..
 Worm    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVK-DTDEVPMILVGNKCDL-EDERVVGK 128

  Fly   134 EEVTDWVFCELPR-LRAKVLECSAKEDSNVTDLFKSLL-SLSRFLPASSSGSGGS 186
            ::..:     |.| ..:..||.|||...||:::|..|: .::|..|.|....|.|
 Worm   129 DQGQN-----LARQFGSAFLETSAKAKINVSEVFYDLVRQINRRYPESGRRQGQS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 54/165 (33%)
rap-1NP_501549.1 Rap1 3..166 CDD:133375 54/169 (32%)

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