DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30158 and REM2

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_016876547.1 Gene:REM2 / 161253 HGNCID:20248 Length:373 Species:Homo sapiens


Alignment Length:207 Identity:62/207 - (29%)
Similarity:93/207 - (44%) Gaps:26/207 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLVLLGGAGVGKSSIVKRF--LFKTYTDKYRATVEDLYNRE--YDLGGVTLKVDILDTSGDMQFP 68
            :::|:|.:|||||::...|  |......:.....||.|.|.  .|...|||.|..:...||.. .
Human   148 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPAEDTYERRIMVDKEEVTLVVYDIWEQGDAG-G 211

  Fly    69 AMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEEIREQRGDFQDIPIVIAGNKADLATTHREVKL 133
            .:|...:.|..||::|::.|...||..|.:....:|..| ...|:|:::.|||:|||.: |||.|
Human   212 WLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGR-PHHDLPVILVGNKSDLARS-REVSL 274

  Fly   134 EE---VTDWVFCELPRLRAKVLECSAKEDSNVTDLFKSLLSLSRFLPASSSGSGGSGG-----GG 190
            ||   :...:.|       |.:|.||....|..:||:..:...|.    ..|...:||     |.
Human   275 EEGRHLAGTLSC-------KHIETSAALHHNTRELFEGAVRQIRL----RRGRNHAGGQRPDPGS 328

  Fly   191 EAAPSGFKRRSS 202
            ...|:...||.|
Human   329 PEGPAPPARRES 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 53/170 (31%)
REM2XP_016876547.1 RGK 147..373 CDD:206715 62/207 (30%)

Return to query results.
Submit another query.