DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30158 and rap2ab

DIOPT Version :10

Sequence 1:NP_652315.2 Gene:CG30158 / 50149 FlyBaseID:FBgn0050158 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001139177.1 Gene:rap2ab / 100003903 ZFINID:ZDB-GENE-090312-116 Length:183 Species:Danio rerio


Alignment Length:172 Identity:57/172 - (33%)
Similarity:94/172 - (54%) Gaps:16/172 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LERIRLVLLGGAGVGKSSIVKRFLFKTYTDKYRATVEDLYNREYDLGGVTLKVDILDTSGDMQFP 68
            :...::|:||..|||||::..:|:..|:.:||..|:||.|.:|.::......::||||:|..||.
Zfish     1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFA 65

  Fly    69 AMRRLSIATAHAFMLVYAATSAPSFQCVKQCFEE-IREQRGDFQDIPIVIAGNKADLATTHREVK 132
            :||.|.|.....|:|||:..:..|||.:|...:: ||.:|  ::.:|:::.|||.|| ...|||.
Zfish    66 SMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKR--YERVPVILVGNKVDL-DNEREVS 127

  Fly   133 LEE----VTDWVFCELPRLRAKVLECSAKEDSNVTDLFKSLL 170
            ..|    ..:|        ....:|.|||..:.|.:||..::
Zfish   128 SSEGQALAEEW--------GCPFMETSAKSKTMVDELFSEIV 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30158NP_652315.2 Ras 8..172 CDD:206642 57/168 (34%)
rap2abNP_001139177.1 Rap2 16..165 CDD:133376 51/157 (32%)

Return to query results.
Submit another query.